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33007fc2

Commit 33007fc2 authored 5 years ago by Ticlla Ccenhua Monica Roxana

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add module preQC, rules for pre-processing paired fastqs

parent 5c7fb77c

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Changes 6

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Snakefile 78 additions, 45 deletions

Snakefile
config.yaml 18 additions, 5 deletions

config.yaml
report/MetagenomicSnake.rst 12 additions, 11 deletions

report/MetagenomicSnake.rst
rules/preprocess.smk 325 additions, 69 deletions

rules/preprocess.smk
rules/rawQC.smk 41 additions, 29 deletions

rules/rawQC.smk
rules/utils.py 270 additions, 0 deletions

rules/utils.py

with 744 additions and 159 deletions

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