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Commit c2fbbfa9 authored by Ticlla Ccenhua Monica Roxana's avatar Ticlla Ccenhua Monica Roxana
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improved for renamig for smoother usage

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# Tacos # TACOS
Tacos is a diverse Set Of Commands And Tools (SOCAT, but TACOS sounds much better!). TACOS is a diverse Set Of Commands And Tools (SOCAT, but TACOS sounds much better!).
## Basic setup ## Basic setup
Create virtual environment Create virtual environment
``` ```
$ conda update conda $ conda update conda
$ conda create --prefix=tacos_env -c intel intelpython3_core python=3.5 icu=58 pandas $ conda create --prefix=<path/tacos_env> -c intel intelpython3_core python=3.5 icu=58 pandas
$ conda activate ./tacos_env $ conda activate <path/tacos_env>
$ conda install -c conda-forge python-igraph $ conda install -c conda-forge python-igraph
``` ```
Install Tacos: Install Tacos:
``` ```
$ git clone $ $ git clone https://git.scicore.unibas.ch/TBRU/tacos.git
$ pip install --editable . $ cd tacos
$ pip install .
``` ```
Run the application: Run the application:
``` ```
$ conda activate <path/tacos_env>
$ tacos --help $ tacos --help
``` ```
or
```
$ <path/tacos_env>/bin/python -m tacos --help
```
To run the tests: To run the tests:
``` ```
$ pytest tests $ pytest tests
``` ```
...@@ -2,8 +2,9 @@ from setuptools import setup ...@@ -2,8 +2,9 @@ from setuptools import setup
setup( setup(
name='tacos', name='tacos',
author='Monica R. Ticlla',
version='0.1', version='0.1',
py_modules=['Tacos'], py_modules=['tacos'],
install_requires=[ install_requires=[
'Click', 'Click',
'numpy', 'numpy',
...@@ -12,6 +13,6 @@ setup( ...@@ -12,6 +13,6 @@ setup(
], ],
entry_points=''' entry_points='''
[console_scripts] [console_scripts]
tacos=Tacos:tacos tacos=tacos:tacos
''', ''',
) )
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