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- DESCRIPTION 1 addition, 1 deletionDESCRIPTION
- R/GSEA_summarize.R 31 additions, 6 deletionsR/GSEA_summarize.R
- R/custom_dotplot.R 40 additions, 0 deletionsR/custom_dotplot.R
- R/hello.R 0 additions, 18 deletionsR/hello.R
- R/latest_file.R 26 additions, 6 deletionsR/latest_file.R
- R/print_data.R 46 additions, 0 deletionsR/print_data.R
- R/reduce_dataset.R 25 additions, 0 deletionsR/reduce_dataset.R
- R/run_GSEA.R 53 additions, 38 deletionsR/run_GSEA.R
- R/run_GSEA_old_deprecatedby17oct23.R 24 additions, 32 deletionsR/run_GSEA_old_deprecatedby17oct23.R
- R/run_QC.R 31 additions, 21 deletionsR/run_QC.R
- R/run_QC_old_deprecatedby17October23.R 73 additions, 0 deletionsR/run_QC_old_deprecatedby17October23.R
- R/shorten_string.R 28 additions, 0 deletionsR/shorten_string.R
- README.html 616 additions, 0 deletionsREADME.html
- README.log 109 additions, 0 deletionsREADME.log
- README.md 131 additions, 44 deletionsREADME.md
- README.tex 242 additions, 0 deletionsREADME.tex
- inst/EXPERIMENTNAME/PCF_data/compress_raw_files.sh 34 additions, 0 deletionsinst/EXPERIMENTNAME/PCF_data/compress_raw_files.sh
- inst/EXPERIMENTNAME/runs_to_exclude.csv 1 addition, 0 deletionsinst/EXPERIMENTNAME/runs_to_exclude.csv
- inst/EXPERIMENTNAME/slurm_scripts/tbeeprotpip_slurm_script.sh 41 additions, 0 deletions.../EXPERIMENTNAME/slurm_scripts/tbeeprotpip_slurm_script.sh
- inst/EXPERIMENTNAME/slurm_scripts/tbeeprotpip_slurm_script_bigRAM.sh 42 additions, 0 deletions...MENTNAME/slurm_scripts/tbeeprotpip_slurm_script_bigRAM.sh
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