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Created with Raphaël 2.2.015Jan1210917Nov16159819Oct1095414Sep7528Aug222118SpellingdevelopdevelopMore fine grained software parametersAdd software parametersStore extra models in associated Zip archiveMerge branch 'develop' into mainmainmainAdd missing softwareRemoved some ToDosMerge branch 'develop' into mainStore non-selected models in archive upon command line optionUse reference DB info from JSON inputGet reference databases from JSONFix for no-selectionNew argument --monomer_objects_dirRun a spell checkFirst draft of protocolGet first protocol stepGet software from fileFirst steps towards a protocolFoxed gathering entitiesGet a proper model nameAdd software to AF2 scoresDEnable compression of ModelCIF files.Outsource PAE file into Zip archiveAdded PAE QA metricAdded global and local pLDDTRemoved a 'ToDo'Notes for scoresNotes on protocol stepsGet draft of ModelCIF 'header'Simplified command line options for now.Argument parsing (early version)Added pyproject.tomlStarted taking NOTES