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Python script that can be used to compress a directory including all its files and subdirectories.

Protein language model embedding based alignment (EBA) method

Extract ligand and binding site information from PDB X-ray validation reports

Riboseq Pipeline

The projects implements a simulation of single cell RNA sequencing (scRNA-seq), accounting for some common sources noise that complicate the analysis of the resulting data.

Run the AlphaFold2 pipeline on the sciCORE cluster... provided by the SWISS-MODEL team ;)

General purpose Snakemake RNA-seq analysis workflow