Explore projects
-
-
Comparative assessment of methods for the computational inference of transcript isoform from RNA-seq data. Submitted to Genome Biology (03-2015).
Updated -
Bienchen / iplt
GNU General Public License v3.0 onlyCopy of of the original IPLT repository
Updated -
-
Python script that can be used to compress a directory including all its files and subdirectories.
Updated -
-
-
TBRU / Treemmer
GNU General Public License v3.0 or laterPython tool to reduce size and redundancy of phylogenetic datasets
Updated -
TBRU / TACOS
Apache License 2.0TACOS is a diverse Set Of Commands And Tools (SOCAT, but TACOS sounds much better!).
Updated -
zavolan_public / PAQR_KAPAC
GNU General Public License v2.0 or laterscripts, pipelines and documentation to run PAQR and KAPAC
KAPAC allows to infer regulatory sequence motifs implicated in 3’ end processing changes
PAQR enables the quantification of poly(A) site usage from standard RNA-seq data
Updated -
Very simple role to disable selinux and reboot the machine
Updated -
-
TBRU / MetagenomicSnake
MIT LicenseMetagenomics pipeline for human microbiome analysis with SnakeMake and singularity containers.
Updated -
zavolan_group / tools / zarp-cli
Apache License 2.0User-friendly command-line interface for the ZARP RNA-Seq analysis pipeline
Updated -
Updated
-
☕ 🐍 🔬 Package for processing metadata from various light-microscopy related data formats.Updated -
imcf / python-imcflibs
GNU General Public License v3.0 only🐍 ☕ 🔩 🔧 A collection of commonly used Python helper functions.Topics: pythonArchived 0Updated -
Fork of the cathsm-server repo (https://github.com/CATH-SWISSMODEL/cathsm-server) for the tutorial "Beyond the usual Docker tutorial - Web apps & CI" at [BC]^2 Conference 2021
Updated -
Jean-Guillaume Piccinali / SPH-EXA_mini-app
MIT LicenseUpdated -
This project contains all scripts and descriptions to enable the execution of a streamlined pipeline that processes A-seq2 read libraries up to the reporting of individual and clustered 3' end processing sites.
Updated