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The projects implements a simulation of single cell RNA sequencing (scRNA-seq), accounting for some common sources noise that complicate the analysis of the resulting data.

Riboseq Pipeline

QMEAN - Qualitative Model Energy ANalysis

ModelArchive Python package... functionality to do all kinds of things with ModelArchive and ModelCIF.

Benchmark pipelines for the ProMod3 modelling engine

ProMod3 - A Versatile Homology Modelling Toolbox

package to correct CTF

Pathways allows you to compute importance scores for a a list of metabolic pathways.