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Iris Mestres Pascual's avatar
Iris Mestres Pascual's avatar
deleted branch feat-output-prefix at zavolan_group / tools / ascii-alignment-pileup
Iris Mestres Pascual's avatar
closed issue #2 "feat: set output file name prefix" at zavolan_group / tools / ascii-alignment-pileup
Iris Mestres Pascual's avatar
  • ba08b20f · feat: add output prefix assignment
Iris Mestres Pascual's avatar
accepted merge request !10 "feat: add output prefix assignment" at zavolan_group / tools / ascii-alignment-pileup
Iris Mestres Pascual's avatar
opened merge request !10 "feat: add output prefix assignment" at zavolan_group / tools / ascii-alignment-pileup
Iris Mestres Pascual's avatar
closed merge request !10 "feat: add output prefix assignment" at zavolan_group / tools / ascii-alignment-pileup
Iris Mestres Pascual's avatar
pushed to branch feat-output-prefix at zavolan_group / tools / ascii-alignment-pileup
  • 63557718 · refactor: use NULL as default
Alex Kanitz's avatar
commented on merge request !10 "feat: add output prefix assignment" at zavolan_group / tools / ascii-alignment-pileup

I am approving already, because I don't think I need to rereview after the minor change I asked for. You can just merge, but make sure to squash me...

Alex Kanitz's avatar
approved merge request !10 "feat: add output prefix assignment" at zavolan_group / tools / ascii-alignment-pileup
Alex Kanitz's avatar
commented on merge request !10 "feat: add output prefix assignment" at zavolan_group / tools / ascii-alignment-pileup

I think it's better to use NULL as default, then check against NULL in the condition below. In that way, if a user wants to set the empty string as...

Iris Mestres Pascual's avatar
opened merge request !10 "feat: add output prefix assignment" at zavolan_group / tools / ascii-alignment-pileup
Iris Mestres Pascual's avatar
pushed to branch feat-output-prefix at zavolan_group / tools / ascii-alignment-pileup
Iris Mestres Pascual's avatar
pushed new branch feat-output-prefix at zavolan_group / tools / ascii-alignment-pileup
Iris Mestres Pascual's avatar
Iris Mestres Pascual's avatar
opened issue #2 "feat: set output file name prefix" at zavolan_group / tools / ascii-alignment-pileup
Mate Balajti's avatar
closed issue #2 "Exons length comparison to choose the best representative transcript" at zavolan_group / tools / Transcript sampler
Mate Balajti's avatar
commented on issue #2 "Exons length comparison to choose the best representative transcript" at zavolan_group / tools / Transcript sampler

This issue will be addressed in a future version, closing it for now.

Mate Balajti's avatar
closed issue #7 "Extract the information we need from the output file" at zavolan_group / tools / Priming site predictor
Mate Balajti's avatar
commented on issue #7 "Extract the information we need from the output file" at zavolan_group / tools / Priming site predictor

This issue will be addressed within the NextFlow pipeline using RIblast.