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Doc update: redesigned modelling module with new loop modelling code.
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- loop/doc/CMakeLists.txt 0 additions, 3 deletionsloop/doc/CMakeLists.txt
- loop/doc/backbone.rst 1 addition, 1 deletionloop/doc/backbone.rst
- loop/doc/index.rst 9 additions, 13 deletionsloop/doc/index.rst
- loop/doc/load_loop_objects.rst 1 addition, 1 deletionloop/doc/load_loop_objects.rst
- loop/doc/structure_db.rst 102 additions, 2 deletionsloop/doc/structure_db.rst
- loop/doc/torsion_sampler.rst 1 addition, 1 deletionloop/doc/torsion_sampler.rst
- modelling/doc/CMakeLists.txt 7 additions, 1 deletionmodelling/doc/CMakeLists.txt
- modelling/doc/gap_handling.rst 293 additions, 0 deletionsmodelling/doc/gap_handling.rst
- modelling/doc/index.rst 17 additions, 494 deletionsmodelling/doc/index.rst
- modelling/doc/loop_candidates.rst 52 additions, 158 deletionsmodelling/doc/loop_candidates.rst
- modelling/doc/loop_closing.rst 76 additions, 90 deletionsmodelling/doc/loop_closing.rst
- modelling/doc/model_checking.rst 29 additions, 0 deletionsmodelling/doc/model_checking.rst
- modelling/doc/monte_carlo.rst 81 additions, 75 deletionsmodelling/doc/monte_carlo.rst
- modelling/doc/pipeline.rst 226 additions, 0 deletionsmodelling/doc/pipeline.rst
- modelling/pymod/_molprobity.py 1 addition, 1 deletionmodelling/pymod/_molprobity.py
- modelling/pymod/_pipeline.py 8 additions, 7 deletionsmodelling/pymod/_pipeline.py
- scoring/doc/index.rst 2 additions, 2 deletionsscoring/doc/index.rst
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