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Commit 3f0bae4c authored by Gerardo Tauriello's avatar Gerardo Tauriello
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Minor doc fixes.

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...@@ -42,17 +42,17 @@ installed on your system. ...@@ -42,17 +42,17 @@ installed on your system.
Build QMEAN Build QMEAN
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QMEAN requires the OpenStructure framework with all its depencies to be QMEAN requires the OpenStructure framework with all its depencies to be
installed. Please follow the instructions on installed. Please follow the instructions on
`openstructure.org <http://www.openstructure.org/>`_ to compile from source. `openstructure.org <http://www.openstructure.org/>`_ to compile from source.
Once you successfully compiled OpenStructure, you need following python modules: Once you successfully compiled OpenStructure, you need following python modules:
* numpy * numpy
* scipy * scipy
* matplotlib * matplotlib
To compile QMEAN, change to the QMEAN directory, make a build directory and run To compile QMEAN, change to the QMEAN directory, make a build directory and run
CMake in there by giving it the path to your openstructure installation CMake in there by giving it the path to your OpenStructure installation
(you might want to activate optimizations with -DOPTIMIZE): (you might want to activate optimizations with -DOPTIMIZE):
.. code-block:: bash .. code-block:: bash
...@@ -85,7 +85,7 @@ Python. Following command enables QMEAN in your current shell: ...@@ -85,7 +85,7 @@ Python. Following command enables QMEAN in your current shell:
export PYTHONPATH=path_to_qmean_build_dir/stage/lib64/python2.7/site-packages:$PYTHONPATH export PYTHONPATH=path_to_qmean_build_dir/stage/lib64/python2.7/site-packages:$PYTHONPATH
You can add this command to .bashrc, so it is set permanently. You can add this command to ``.bashrc``, so it is set permanently.
If everything is setup correctly, you can test the setup in an If everything is setup correctly, you can test the setup in an
interactive ost session by typing: from "qmean import *" interactive ost session by typing: from ``qmean import *``
or, even better, run the example scripts from the documentation. or, even better, run the example scripts from the documentation.
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