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Commit 8537de60 authored by B13nch3n's avatar B13nch3n
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Replace Docker image tag 4.2.0 with 'latest'.

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......@@ -105,12 +105,12 @@ downloaded by either pulling it yourself or let Docker pull it first time you
run it. To actively pull, use the following command:
```terminal
$ docker pull registry.scicore.unibas.ch/schwede/qmean:4.2.0
4.2.0: Pulling from schwede/qmean
$ docker pull registry.scicore.unibas.ch/schwede/qmean:latest
latest: Pulling from schwede/qmean
...
Digest: sha256:db53a753d46b2525051478f9fa273df2b47a69100663eb70d538b461d52743d5
Status: Downloaded newer image for registry.scicore.unibas.ch/schwede/qmean:4.2.0
registry.scicore.unibas.ch/schwede/qmean:4.2.0
Status: Downloaded newer image for registry.scicore.unibas.ch/schwede/qmean:latest
registry.scicore.unibas.ch/schwede/qmean:latest
$
```
......@@ -189,7 +189,7 @@ Having everything setup, you can score `model.pdb` with SEQRES data stored in
`seqres.fasta` using QMEANDisCo:
```terminal
docker run --workdir $(pwd) -v $(pwd):$(pwd) -v <PATH_TO_LOCAL_UNICLUST>:/uniclust30 -v <PATH_TO_LOCAL_QMTL>:/qmtl registry.scicore.unibas.ch/schwede/qmean:4.2.0 run_qmean.py model.pdb --seqres seqres.fasta
docker run --workdir $(pwd) -v $(pwd):$(pwd) -v <PATH_TO_LOCAL_UNICLUST>:/uniclust30 -v <PATH_TO_LOCAL_QMTL>:/qmtl registry.scicore.unibas.ch/schwede/qmean:latest run_qmean.py model.pdb --seqres seqres.fasta
```
Additionally to the mounts specified above, the current working directory
......@@ -199,7 +199,7 @@ as workdir.
The following gives more details on additional command line arguments:
```terminal
docker run registry.scicore.unibas.ch/schwede/qmean:4.2.0 run_qmean.py --help
docker run registry.scicore.unibas.ch/schwede/qmean:latest run_qmean.py --help
```
<a name="singularity"></a>Singularity
......@@ -208,7 +208,7 @@ docker run registry.scicore.unibas.ch/schwede/qmean:4.2.0 run_qmean.py --help
A Singularity Image can directly be pulled & build from our registry:
```terminal
singularity build qmean_container.sif docker://registry.scicore.unibas.ch/schwede/qmean:4.2.0
singularity build qmean_container.sif docker://registry.scicore.unibas.ch/schwede/qmean:latest
```
Singularity allows to directly access the current working directory from within the container,
......
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