docu update and added examples

docker/qmean_qmeandisco_example/targets.fasta

docker/qmeanbrane_example/README.md

...ple/my_workdir/2044234b0bd6d322ef6c15ab03394e61/accpro_in

...le/my_workdir/2044234b0bd6d322ef6c15ab03394e61/accpro_out

...orkdir/2044234b0bd6d322ef6c15ab03394e61/query_hhblits.a3m

...kdir/2044234b0bd6d322ef6c15ab03394e61/query_hhblits.fasta

...orkdir/2044234b0bd6d322ef6c15ab03394e61/query_hhblits.hhm

docker/qmeanbrane_example/original_hhblits_alignment.pdb

docker/qmeanbrane_example/out.json

docker/qmeanbrane_example/query_hhblits.a3m

docker/qmeanbrane_example/shift_in_front_helix_four.pdb

docker/qmeanbrane_example/shift_into_middle.pdb

docker/qmeanbrane_example/shift_towards_cter.pdb

docker/qmeanbrane_example/targets.fasta