Step-1, App created and models ready to be activated

LigandWorld/LigandWorld/settings.py

+"""
+Django settings for LigandWorld project.
+
+Generated by 'django-admin startproject' using Django 1.8.2.
+
+For more information on this file, see
+https://docs.djangoproject.com/en/1.8/topics/settings/
+
+For the full list of settings and their values, see
+https://docs.djangoproject.com/en/1.8/ref/settings/
+"""
+
+# Build paths inside the project like this: os.path.join(BASE_DIR, ...)
+import os
+
+BASE_DIR = os.path.dirname(os.path.dirname(os.path.abspath(__file__)))
+
+
+# Quick-start development settings - unsuitable for production
+# See https://docs.djangoproject.com/en/1.8/howto/deployment/checklist/
+
+# SECURITY WARNING: keep the secret key used in production secret!
+SECRET_KEY = '#v!-r@6de=w&6*pzb&em(*jvk(c90x=mqlr=(6_6qf3z#^+t#e'
+
+# SECURITY WARNING: don't run with debug turned on in production!
+DEBUG = True
+
+ALLOWED_HOSTS = []
+
+
+# Application definition
+
+INSTALLED_APPS = (
+    'django.contrib.admin',
+    'django.contrib.auth',
+    'django.contrib.contenttypes',
+    'django.contrib.sessions',
+    'django.contrib.messages',
+    'django.contrib.staticfiles',
+    'annotator'
+)
+
+MIDDLEWARE_CLASSES = (
+    'django.contrib.sessions.middleware.SessionMiddleware',
+    'django.middleware.common.CommonMiddleware',
+    'django.middleware.csrf.CsrfViewMiddleware',
+    'django.contrib.auth.middleware.AuthenticationMiddleware',
+    'django.contrib.auth.middleware.SessionAuthenticationMiddleware',
+    'django.contrib.messages.middleware.MessageMiddleware',
+    'django.middleware.clickjacking.XFrameOptionsMiddleware',
+    'django.middleware.security.SecurityMiddleware',
+)
+
+ROOT_URLCONF = 'LigandWorld.urls'
+
+TEMPLATES = [
+    {
+        'BACKEND': 'django.template.backends.django.DjangoTemplates',
+        'DIRS': [],
+        'APP_DIRS': True,
+        'OPTIONS': {
+            'context_processors': [
+                'django.template.context_processors.debug',
+                'django.template.context_processors.request',
+                'django.contrib.auth.context_processors.auth',
+                'django.contrib.messages.context_processors.messages',
+            ],
+        },
+    },
+]
+
+WSGI_APPLICATION = 'LigandWorld.wsgi.application'
+
+
+# Database
+# https://docs.djangoproject.com/en/1.8/ref/settings/#databases
+
+DATABASES = {
+    'default': {
+        'ENGINE': 'django.db.backends.sqlite3',
+        'NAME': os.path.join(BASE_DIR, 'db.sqlite3'),
+    }
+}
+
+
+# Internationalization
+# https://docs.djangoproject.com/en/1.8/topics/i18n/
+
+LANGUAGE_CODE = 'en-us'
+
+TIME_ZONE = 'UTC'
+
+USE_I18N = True
+
+USE_L10N = True
+
+USE_TZ = True
+
+
+# Static files (CSS, JavaScript, Images)
+# https://docs.djangoproject.com/en/1.8/howto/static-files/
+
+STATIC_URL = '/static/'
+
+STATICFILES_DIRS = (
+    os.path.join(BASE_DIR, "static"),
+)
+
+try:
+    from local_settings import *
+except ImportError:
+    pass
\ No newline at end of file

LigandWorld/LigandWorld/urls.py

+"""LigandWorld URL Configuration
+
+The `urlpatterns` list routes URLs to views. For more information please see:
+    https://docs.djangoproject.com/en/1.8/topics/http/urls/
+Examples:
+Function views
+    1. Add an import:  from my_app import views
+    2. Add a URL to urlpatterns:  url(r'^$', views.home, name='home')
+Class-based views
+    1. Add an import:  from other_app.views import Home
+    2. Add a URL to urlpatterns:  url(r'^$', Home.as_view(), name='home')
+Including another URLconf
+    1. Add an import:  from blog import urls as blog_urls
+    2. Add a URL to urlpatterns:  url(r'^blog/', include(blog_urls))
+"""
+from django.conf.urls import include, url
+from django.contrib import admin
+
+urlpatterns = [
+    url(r'^admin/', include(admin.site.urls)),
+]

LigandWorld/LigandWorld/wsgi.py

+"""
+WSGI config for LigandWorld project.
+
+It exposes the WSGI callable as a module-level variable named ``application``.
+
+For more information on this file, see
+https://docs.djangoproject.com/en/1.8/howto/deployment/wsgi/
+"""
+
+import os
+
+from django.core.wsgi import get_wsgi_application
+
+os.environ.setdefault("DJANGO_SETTINGS_MODULE", "LigandWorld.settings")
+
+application = get_wsgi_application()

LigandWorld/annotator/admin.py

+from django.contrib import admin
+
+# Register your models here.

LigandWorld/annotator/models.py

+from django.db import models
+
+# Create your models here.
+
+class Biounit(models.Model):
+	class Meta:					# Optional but
+		db_table = 'biounits'	# Recommended, name your DB table
+
+	smtl_id = models.CharField(max_length=10)
+	title = models.TextField()
+	resolution = models.FloatField()
+
+class Ligand(models.Model):
+	class Meta:					# Optional but
+		db_table = 'ligands'	# Recommended, name your DB table
+
+	biounit = models.ForeignKey(Biounit)
+	shortname = models.CharField(max_length=3)
+	longname = models.TextField()
+	annotation = models.CharField(max_length=128,
+					 			  choices=(
+									('unknown','Unknown'),
+									('irrelevant','Non-functional Binders'),
+									('buffer','Buffer'),
+									('solvent','Solvent'),
+									('impurity','Precipitate/Ion/Organic Non-Binder'),
+									('covalent','Covalent'),
+									('ptm','Post Translational Modification'),
+									('chemically_modified','Chemical modification'),
+									('non-covalent','Non-covalent'),
+									('natural','Natural, non covalently bound'),
+									('synthetic','Synthetic, non covalently bound'))
+                   				 )

LigandWorld/annotator/tests.py

+from django.test import TestCase
+
+# Create your tests here.

LigandWorld/annotator/views.py

+from django.shortcuts import render
+
+# Create your views here.

LigandWorld/manage.py

+#!/usr/bin/env python
+import os
+import sys
+
+if __name__ == "__main__":
+    os.environ.setdefault("DJANGO_SETTINGS_MODULE", "LigandWorld.settings")
+
+    from django.core.management import execute_from_command_line
+
+    execute_from_command_line(sys.argv)

pip_freeze.txt

+Django==1.8.2