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Andreas Schenk authoredAndreas Schenk authored
image_formats.rst 8.03 KiB
Supported Image File Formats
CCP4
Format used by the ccp4 software package
- Recognized file extensions: ccp4, map
- Recognized based on content: yes
- File import: yes
- File export: yes
| param normalize_on_save: | Determines wether to renormalize image upon saving. |
|---|---|
| type normalize_on_save: | bool |
| param endianess_on_save: | Byte order for saving. |
| type endianess_on_save: | ost.io.Endianess |
DAT
Simple binary format for square images
- Recognized file extensions: dat, img
- Recognized based on content: no
- File import: yes
- File export: yes
| param normalize_on_save: | Determines wether to renormalize image upon saving. |
|---|---|
| type normalize_on_save: | bool |
| param format: | Data format for loading and saving. |
| type format: | ost.io.Format |
| param signed: | Determines wether data is interpreted as signed or unsigned values during loading and saving. |
| type signed: | bool |
| param endianess: | Byte order for loading and saving. |
| type endianess: | ost.io.Endianess |
DF3
PovRay Density file format
- Recognized file extensions: df3
- Recognized based on content: no
- File import: no
- File export: yes
| param normalize_on_save: | Determines wether to renormalize image upon saving. |
|---|---|
| type normalize_on_save: | bool |
DM3
Format used by Gatan Inc.'s Digital Micrograph software
- Recognized file extensions: dm3
- Recognized based on content: yes
- File import: yes
- File export: no
DX
Format used by the OpenDX software package
- Recognized file extensions: dx
- Recognized based on content: no
- File import: yes
- File export: yes
| param normalize_on_save: | Determines wether to renormalize image upon saving. |
|---|---|
| type normalize_on_save: | bool |
IPL
Ditabis Micron Image Plate Scanner Format
- Recognized file extensions: ipl
- Recognized based on content: yes
- File import: yes
- File export: yes
| param normalize_on_save: | Determines wether to renormalize image upon saving. |
|---|---|
| type normalize_on_save: | bool |
| param format: | Data format for loading and saving. |
| type format: | ost.io.Format |
JPK
Format used by JPK Instruments AG's software (Customized Tiff format)
- Recognized file extensions: jpk
- Recognized based on content: no (jpk files without file extension are recognized as tif)
- File import: yes
- File export: yes
| param normalize_on_save: | Determines wether to renormalize image upon saving. |
|---|---|
| type normalize_on_save: | tribool |
| param format: | Data format for loading and saving. |
| type format: | ost.io.Format |
| param signed: | Determines wether data is interpreted as signed or unsigned values during loading and saving. |
| type signed: | bool |
| param phasecolor: | Determines wether the phases of complex values are encoded as color information. |
| type phasecolor: | bool |
| param subimage: | Determines which subimage is read from a multi-image jpk (-1 = default image). |
| type subimage: | int |
MRC
Format used by the MRC software package
- Recognized file extensions: mrc
- Recognized based on content: yes
- File import: yes
- File export: yes
| param normalize_on_save: | Determines wether to renormalize image upon saving. |
|---|---|
| type normalize_on_save: | bool |
| param subformat: | Determines wether old style or new style mrc files should be saved. |
| type subformat: | ost.io.Subformat |
| param endianess_on_save: | Byte order for saving. |
| type endianess_on_save: | ost.io.Endianess |
Nanoscope
Format used by software from Veeco
- Recognized file extensions: mod
- Recognized based on content: no
- File import: yes
- File export: yes
| param subimage: | Determines which subimage is read from a multi-image nanoscope file (-1 = default image). |
|---|---|
| type subimage: | int |
PNG
Portable Network Graphic image format
- Recognized file extensions: png
- Recognized based on content: yes
- File import: yes
- File export: yes
| param normalize_on_save: | Determines wether to renormalize image upon saving. |
|---|---|
| type normalize_on_save: | bool |
Situs
Format used by the Situs software package
- Recognized file extensions: situs, sit
- Recognized based on content: no
- File import: yes
- File export: yes
| param normalize_on_save: | Determines wether to renormalize image upon saving. |
|---|---|
| type normalize_on_save: | bool |
Spider
Format used by the Spider software package
- Recognized file extensions: spi
- Recognized based on content: no
- File import: yes
- File export: yes
| param normalize_on_save: | Determines wether to renormalize image upon saving. |
|---|---|
| type normalize_on_save: | bool |
| param endianess_on_save: | Byte order for saving. |
| type endianess_on_save: | ost.io.Endianess |
TIF
Tagged Image File Format
- Recognized file extensions: tif, tiff
- Recognized based on content: yes
- File import: yes
- File export: yes
| param normalize_on_save: | Determines wether to renormalize image upon saving. |
|---|---|
| type normalize_on_save: | tribool |
| param format: | Data format for loading and saving. |
| type format: | ost.io.Format |
| param signed: | Determines wether data is interpreted as signed or unsigned values during loading and saving. |
| type signed: | bool |
| param phasecolor: | Determines wether the phases of complex values are encoded as color information. |
| type phasecolor: | bool |
| param subimage: | Determines which subimage is read from a multi-image tif (-1 = default image). |
| type subimage: | int |