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Verified Commit 291cb80e authored by Xavier Robin's avatar Xavier Robin
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doc: fix small typos

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......@@ -55,7 +55,7 @@ class LigandScorer:
Note that this global chain mapping currently ignores non polymer entities
such as small ligands, and may result in overly pessimistic scores.
By defaults, target-model ligand assignments are computed independently
By default, target-model ligand assignments are computed independently
for the RMSD and lDDT-PLI scores. For RMSD, each model ligand is uniquely
assigned to a target ligand, starting from the "best" possible mapping
(lowest RMSD) and using each target and model ligand in a single
......@@ -78,7 +78,7 @@ class LigandScorer:
scoring. :ref:`Molck <molck>` should be used with extra
care, as many of the options (such as `rm_non_std` or `map_nonstd_res`) can
cause ligands to be removed from the structure. If cleanup with Molck is
needed, ligands should be kept and passed separately. Non-ligand residues
needed, ligands should be kept aside and passed separately. Non-ligand residues
should be valid compounds with atom names following the naming conventions
of the component dictionary. Non-standard residues are acceptable, and if
the model contains a standard residue at that position, only atoms with
......
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