Removed debug output.

modules/bindings/pymod/hhblits.py

@@ -540,9 +540,6 @@ class HHblits:
         :rtype: :class:`str`
         """
         a3m_file = '%s.a3m' % os.path.splitext(self.filename)[0]
-        print "A3MFILE", a3m_file
-        print "A3MFILE", a3m_file, self.filename
-        print "A3MFILE", a3m_file
         ost.LogInfo('Using hhblits from "%s"' % self.hhsuite_root)
         full_nrdb = os.path.join(os.path.abspath(os.path.split(nrdb)[0]),
                                  os.path.split(nrdb)[1])
@@ -584,10 +581,6 @@ class HHblits:
                 ost.LogWarning('Predicting secondary structure for MSA '+
                                '(%s) failed, on command: %s' % (a3m_file, line))
             return a3m_file
-            print "BIENCHEN", line
-        lines = serr.splitlines()
-        for line in lines:
-            print "BIENCHEN", line
         return a3m_file
 
     def A3MToProfile(self, a3m_file, hhm_file=None):