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Commit 4cc41883 authored by stefan's avatar stefan
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Unittests for AlignedRegion check other regions

git-svn-id: https://dng.biozentrum.unibas.ch/svn/openstructure/trunk@2233 5a81b35b-ba03-0410-adc8-b2c5c5119f08
parent aef10566
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......@@ -104,16 +104,16 @@ BOOST_AUTO_TEST_CASE(aligned_region_replace)
SequenceHandle seq12 = CreateSequence("S2","ghijk-l");
a1.AddSequence(seq11);
a1.AddSequence(seq12);
AlignedRegion ar1 = a1.MakeRegion(1,2);
AlignedRegion ar1 = a1.MakeRegion(2,2);
AlignmentHandle a2 = CreateAlignment();
SequenceHandle seq21 = CreateSequence("S1","zzzzzzz");
SequenceHandle seq22 = CreateSequence("S2","ee-----");
a2.AddSequence(seq21);
a2.AddSequence(seq22);
AlignedRegion ar2 = a2.MakeRegion(1,2);
AlignedRegion ar2 = a2.MakeRegion(2,2);
ar1.Replace(ar2);
BOOST_CHECK_EQUAL(a1.GetSequence(0).GetString(),"azzcdef");
BOOST_CHECK_EQUAL(a1.GetSequence(1).GetString(),"ge-jk-l");
BOOST_CHECK_EQUAL(a1.GetSequence(0).GetString(),"abzzdef");
BOOST_CHECK_EQUAL(a1.GetSequence(1).GetString(),"gh--k-l");
a1 = CreateAlignment();
seq11 = CreateSequence("S1","ab-cdef");
......
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