TmTools for windows Fixed (Escaping problem)

git-svn-id: https://dng.biozentrum.unibas.ch/svn/openstructure/trunk@2634 5a81b35b-ba03-0410-adc8-b2c5c5119f08

modules/bindings/pymod/tmtools.py

@@ -75,7 +75,7 @@ def _RunTmAlign(tmalign, tmp_dir):
   model2_filename=os.path.join(tmp_dir, 'model02.pdb')
   if platform.system() == "Windows":
     tmalign_path=settings.Locate('tmalign.exe', explicit_file_name=tmalign)
-    command="\"%s\" \"%s\" \"%s\"" %(os.path.normpath(tmalign_path), model1_filename, model2_filename)
+    command="\"%s\" %s %s" %(os.path.normpath(tmalign_path), model1_filename, model2_filename)
   else:
     tmalign_path=settings.Locate('tmalign', explicit_file_name=tmalign)  
     command="\"%s\" \"%s\" \"%s\"" %(tmalign_path, model1_filename, model2_filename)
@@ -120,7 +120,7 @@ def _RunTmScore(tmscore, tmp_dir):
   model2_filename=os.path.join(tmp_dir, 'model02.pdb')  
   if platform.system() == "Windows":
     tmscore_path=settings.Locate('tmscore.exe', explicit_file_name=tmscore)
-    command="\"%s\" \"%s\" \"%s\"" %(os.path.normpath(tmscore_path), model1_filename, model2_filename)
+    command="\"%s\" %s %s" %(os.path.normpath(tmscore_path), model1_filename, model2_filename)
   else:
     tmscore_path=settings.Locate('tmscore', explicit_file_name=tmscore)
     command="\"%s\" \"%s\" \"%s\"" %(tmscore_path, model1_filename, model2_filename)