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Commit afa3d8e5 authored by Gerardo Tauriello's avatar Gerardo Tauriello
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Clarify seqres doc for LoadMMCIF.

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...@@ -290,13 +290,20 @@ def LoadMMCIF(filename, fault_tolerant=None, calpha_only=None, profile='DEFAULT' ...@@ -290,13 +290,20 @@ def LoadMMCIF(filename, fault_tolerant=None, calpha_only=None, profile='DEFAULT'
remote pdb repository www.pdb.org. The filename is then interpreted as the remote pdb repository www.pdb.org. The filename is then interpreted as the
pdb id. pdb id.
:rtype: :class:`~ost.mol.EntityHandle`. :rtype: :class:`~ost.mol.EntityHandle` (or tuple if *seqres* or *info* are
True).
:param seqres: Whether to read SEQRES records. If set to True, the loaded
entity and seqres entry will be returned as second item. :param seqres: Whether to read SEQRES records. If True, a
:class:`~ost.seq.SequenceList` object is returned as the second
item. The sequences in the list are named according to the
mmCIF chain name.
This feature requires a default
:class:`compound library <ost.conop.CompoundLib>`
to be defined and accessible via
:func:`~ost.conop.GetDefaultLib` or an empty list is returned.
:param info: Whether to return an info container with the other output. :param info: Whether to return an info container with the other output.
Returns a :class:`MMCifInfo` object as last item. If True, a :class:`MMCifInfo` object is returned as last item.
:raises: :exc:`~ost.io.IOException` if the import fails due to an erroneous :raises: :exc:`~ost.io.IOException` if the import fails due to an erroneous
or non-existent file. or non-existent file.
......
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