fixing symlinks to software stack is available in the container

.gitlab-ci.yml

@@ -11,7 +11,7 @@ stages:
 before_script:
   - echo "Running global 'before_script'..."
   - yum -y -q -e 0 install tcl
-  - mkdir -p /scicore/soft/modules
+  - mkdir -p /scicore/soft/
   - ln -s /export/soft/apps/centos6/generic /scicore/soft/apps
   - ln -s /export/soft/modules/centos6/generic/all /scicore/soft/modules
   - source /export/soft/lua_lmod/centos6/lmod/lmod/init/bash
@@ -34,7 +34,7 @@ build:centos6.6:
   image: centos:6.6
   script:
   - echo "Building on CentOS 6..."
-  - /scicore/soft/apps/GCC/4.7.2/bin/c++
+  - cmake --help
   - cmake .. -DENABLE_MM=1
              -DOPEN_MM_LIBRARY=$EBROOTOPENMM/lib/libOpenMM.so
              -DOPEN_MM_PLUGIN_DIR=$EBROOTOPENMM/lib/plugins