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Created with Raphaël 2.2.021Jul2018171615131097225Jun2218157218May131127Apr20171626Mar2319161163226Feb2524201918171413121110765329Jan171413107230Dec201918171698653229Nov2827262523212015141323Oct144330Sep2523328Aug12510Jul942124Jun191817141312331May29272423222016151413924Apr179320Mar1514625Feb2019171411765432130Jan24221615141311109818Dec13328Nov222120923Oct326Sep2413106514Aug13109731Jul201918106229Jun115425May2327Apr2625242320191816131211105431Mar2928272322212018161514Don't test secondary structure annotationmake HHblits tests agnostic of any scicore specific env variablesSeparate bindings for HHblits2 and HHblits3Fix unit testMark branched entities as polymersSpellingSCHWED-4848: Function to get chain names of branched entitisSCHWED-4850: Essential documentationDocumentation and renaming of a class for branched entitiesMerge branch 'develop' into carbohydratesUpdate macOS installation instructionsSCHWED-4846: Admire branched entitiy links bond orders.SCHWED-4835: Connect branched entities when loaded from mmCIFRemoved the need for an Editor from connecting branched entities out of mmCIFInfoSCHWED-4847: Export functions to handle branched entitites to PythonSCHWED-4847: Export the entity branch mapSCHWED-4847: Export the MMCifInfoEntityBranch class to Python.SCHWED-4835: Create bonds for entity branch on per atom pair basisSCHWED-4835: Create bonds for entityt branch linksUpdate macOS installation instructionsSCHWED-4696: Unit testing pdbx_entity_branch parsingSCHWED-4696: Read pdbx_entity_branch for a better chain descriptionSCHWED-4696: Mention new branched chain type in documentation.SCHWED-4696: Allow 'branched' chain(types)document default values in profile buildinguse subprocess.run instead of PopenFixed spellingA hint for macOS issues.Update compilattion instructions for macOSMove secondary structure assignment in a3m building to separate functionBugfix patch of HHblits 3.2 module on sciCORE cluster changes outputavoid hardcoded evalue thresh when building hhblits profilegive missing argument a default value to make example code run through...load sequence profiles from stringsignore columns where both sequences have a gap - an error was thrown in such casesEnable documentation parser to deal with unicodeUpdate macOS installation instructionswrap data extracted from linear dbs in single objectsMake data extraction helper specific to their tasks: DisCo and GMQEAdded new ChemClass observed in HSQ