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Created with Raphaël 2.2.027Nov2322211615149831Oct242322Sep2120191186429Aug2824231817161511109831Jul2726252422211918141210765329Jun282320191512652131May302625242316121110954221Apr2019629Mar28242317161310976532128Feb222120171615109876131Jan3027262524232220191817161353123Dec222130Nov292818171615832131Oct2725427Sep252220141312876129Aug2625242322191816158432129Jul28272625131211658Jun32124May181710954228Apr27212019141312821Feb27Jan26252420192Dec29Nov2221191726Oct16Sepmmcif writer: updatestest: bond sorting not consistent across architectures2.6.0-rc42.6.0-rc4test: remove compound lib only after tests are completeDisable unit test for internal coordinates edge case2.6.0-rc32.6.0-rc3fix static_cast overflow in LocateAtomfeat: SCHWED-6059 coverage delta in actionfix: SCHWED-6059 increase coverage_deltafix: SCHWED-6059 revisit coverage and avoid threshold effectdoc: no bracketsRevert "avoid atan2(0.0, 0.0) in Dihedral::SetAngleICS"document internal processor functionsmmcif writer: write _entity, _struct_asym, _entity_poly_seq categoriesfix static_cast overflow in LocateAtomExperimental code for mmcif writingMore flexible Doxygen configupdate CHANGELOG2.6.0-rc22.6.0-rc2USalign: pass chain mapping in internal USalign code copyupdate USalign source codeScoring: round JSON results of compare-structures actionUpdate Doxygen configurationScoring: Use consistent definition of n_max_naive parameterScoring: several tweaks to simplify processing by the SWISS-MODEL web interfaceScoring: add number of native and model contacts as attributes to ScorerScoring: allow injection of Scorer mapping to USalign for tm-score computationContact scores - Enable per-interface IPS scoringContact scores - Enable per-interface ICS scoringUSalign: pass custom chain mapping as -chainmap argumenttest: refactor assertsOMF: Update storage procedure for coordinatesOMF: test max_errorfix: default should be 10log: leave some trace of lack of valid contactsfix: SCHWED-6059 consider coverage in assignmentdocu updatesfix: SCHWED-6059 keep track of substructure coveragetest: fix invalid entity view.fix: SCHWED-6050 check status correctly to avoid assertion errorOMF: cleanupBiounits: chnge in chain naming strategy and added docuOMF: refactoring with breaking changes