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Created with Raphaël 2.2.022Jan20191817161353123Dec222130Nov292818171615832131Oct2725427Sep252220141312876129Aug2625242322191816158432129Jul28272625131211658Jun32124May181710954228Apr27212019141312821Feb27Jan26252420192Dec29Nov2221191726Oct16Sep1518Aug30Jul15130Jun1710May76530Apr24Mar20Feb936Jan530Dec111018Nov1098654228Oct27252115131076517Sep28Aug20631Jul3027242322212018171615131097225Jun2218157218May131127Apr20171626Mar2319161163226Feb2524201918171413121110765329Jan171413107230Dec201918171698653229Nov2827262523212015141323Oct144330Sep2523328Aug12dockq refactorfeat: SCHWED-5783 implement ligand assignmenttest: SCHWED-5783 speedup testfeat: SCHWED-5783 add check_resnamedoc: SCHWED-5783 add new functionsMerge branch 'develop' into ligand_scoringfeat: SCHWED-5783 compute lDDT-PLI and RMSDfeat: SCHWED-5783 get flat chain mapping for representationrefactor: SCHWED-5783 rename LigandRMSD to SCRMSDbugfixrefactor: SCHWED-5783 move by_atom_index to ResidueToGraphRe-enable Qt 5.10feat: SCHWED-5783 document more assumptionsfeat: SCHWED-5783 ensure is_ligand is set properly upon Copy()feat: SCHWED-5783 implement symmetry-corrected RMSDOptionally pass alignments to DockQremove extra empty linesdoc: IsLigand and IsProteinfeat: SCHWED-5783 document assumptions betterscoring: ensure that DockQ is only computed for polypep chainsMerge branch 'develop' into ligand_scoringno need to enforce matching residue numbers in PatchDockQ scoresbugfixintegrate OST DockQ implementation in Scorer objectOST specific DockQ implementationdoc: document BondHandlefix: enable passing by argument (makes documentation easier)refactor: add common properties of other handlesdoc: there is no 'other' property (not possible)feat: SCHWED-5783 add networkx dependencyfeat: SCHWED-5783 don't rename/renumber ligandsdoc: add ligand_scoring to online docdoc: fix error messagefix: SCHWED-5783 update only if usedtest: SCHWED-5783 activate tests in make checkMerge branch 'develop' into ligand_scoringfix: copy chain type and description in Copy()feat: SCHWED-5783 skeleton for ligand scoringfeat: SCHWED-5783 accept ligands as inputMerge branch 'develop' into ligand_scoring