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Created with Raphaël 2.2.017Sep28Aug20631Jul3027242322212018171615131097225Jun2218157218May131127Apr20171626Mar2319161163226Feb2524201918171413121110765329Jan171413107230Dec201918171698653229Nov2827262523212015141323Oct144330Sep2523328Aug12510Jul942124Jun191817141312331May29272423222016151413924Apr179320Mar1514625Feb2019171411765432130Jan24221615141311109818Dec13328Nov222120923Oct326Sep2413106514Aug13109731Jul201918106229Jun115425May2327Apr2625242320191816131211105431MarMerge branch 'release-2.1.0' into master2.1.02.1.0fix DeprecationWarning: invalid escape sequence \d in regexAdded missing chem.types from the comounds dictionarySCHWED-4896: extend control in PDBize2.1.0-rc32.1.0-rc3SCHWED-4896: Add IsOligosaccharide function with documentation and unit testsResidue numbers must be unique when using them to align residues to a SEQRESUpdate versions in macOS installation instructionsFixed PDBize to restore bonds in branched entities correctly.2.1.0-rc22.1.0-rc2Disallow rnums outside SEQRES range if try_resnum_first in AlignToSEQRESdoc: SCHWED-862 we have InChI annotations in the compound libdoc: make it clear that GetMMCifPDBChainTr needs an entity read with seqres=TrueUpdate compile instructions for Ubuntu / DebianAllow sip import in newer versions of PyQt5Update version to 2.1.02.1.0-rc2.1.0-rcFix spellingFix spellingsimplify docuSCHWED-4858: Added changelog info for the carbohydrate extensionfix: SCHWED-4859 No overrun of insertion codes by large ligandsmake HHblits unit test specific to version 3, as version 2 is deprecatedclarify error message when determining HHblits version stringdon't autoimport everything in binding moduleUse pdbx_entity_branch connectivity data in DNGupdate CHANGELOGMerge branch 'hhblits3' into developSCHWED-4851: some unit tests for branched entitiesMerge branch 'develop' into hhblits3Revert "allow to extract template info from several LinearPositionContainer at once"Revert "Make data extraction helper specific to their tasks: DisCo and GMQE"Revert "wrap data extracted from linear dbs in single objects"SCHWED-4850: fixes to the documentationSCHWED-4849: Allow to get branched entity information for a specific chainSCHWED-4848: Gather ChainHandles of branched entities, documentationSCHWED-4848: Gather ChainHandles of branched entities, Python exportSCHWED-4848: Gather ChainHandles of branched entitiesAllow free positioning of entity category in mmCIF fileshhblits docu updatesrelax unit test for HHblits searchDon't test secondary structure annotationmake HHblits tests agnostic of any scicore specific env variables
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