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Bind-n-Seq PWMs
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43a208c7

Commit 43a208c7 authored 2 years ago by Niels Schlusser

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First commit, include README, c++ program, and python script

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Makefile 5 additions, 0 deletions

Makefile
README.txt 34 additions, 0 deletions

README.txt
cluster_main.cpp 198 additions, 0 deletions

cluster_main.cpp
inout.h 222 additions, 0 deletions

inout.h
main.cpp 198 additions, 0 deletions

main.cpp
params.h 24 additions, 0 deletions

params.h
python_scripts/background_log_likelihood.py 131 additions, 0 deletions

python_scripts/background_log_likelihood.py
python_scripts/compare_kmers.py 148 additions, 0 deletions

python_scripts/compare_kmers.py
python_scripts/count_possible_kmers.sh 9 additions, 0 deletions

python_scripts/count_possible_kmers.sh
python_scripts/nucleotide_bias.py 66 additions, 0 deletions

python_scripts/nucleotide_bias.py
python_scripts/plot.sh 55 additions, 0 deletions

python_scripts/plot.sh
python_scripts/rank_kmers.py 140 additions, 0 deletions

python_scripts/rank_kmers.py
update.h 477 additions, 0 deletions

update.h

with 1707 additions and 0 deletions

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