Many changes: count of oligos, identification of overrepresented sequences,...
Many changes: count of oligos, identification of overrepresented sequences, trimming of bases in the beginning in case of the smarter-kit protocol.
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- .gitignore 10 additions, 0 deletions.gitignore
- snakemake/prepare_annotation/config.yaml 3 additions, 3 deletionssnakemake/prepare_annotation/config.yaml
- snakemake/process_data/Snakefile 62 additions, 2 deletionssnakemake/process_data/Snakefile
- snakemake/process_data/config.yaml 7 additions, 6 deletionssnakemake/process_data/config.yaml
- snakemake/process_data/scripts/find_overepresented_sequences.py 121 additions, 0 deletions...ake/process_data/scripts/find_overepresented_sequences.py
- snakemake/process_data/scripts/scanAdapter.sh 24 additions, 0 deletionssnakemake/process_data/scripts/scanAdapter.sh
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