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expected_output.md5 6.11 KiB
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Dominik Burri's avatar
replaced synthetic test by new one.  
Dominik Burri committed
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90e42aa46890e9cd0a47800428699fbf  results/alfa_indexes/homo_sapiens/75/ALFA/sorted_genes.stranded.ALFA_index
ccc3cf5a57fddb0d469e597d4376b1bf  results/alfa_indexes/homo_sapiens/75/ALFA/sorted_genes.unstranded.ALFA_index
BIOPZ-Katsantoni Maria's avatar
Major refactoring  
BIOPZ-Katsantoni Maria committed
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e5959524a2daf35da9249fb313920315  results/samples/paired_end_R1_on_minus_antisense/ALFA/Unique/paired_end_R1_on_minus_antisense.ALFA_feature_counts.tsv
c406c1800d3690dd774aaa7e3c190523  results/samples/paired_end_R1_on_minus_sense/ALFA/Unique/paired_end_R1_on_minus_sense.ALFA_feature_counts.tsv
c406c1800d3690dd774aaa7e3c190523  results/samples/paired_end_R1_on_plus_antisense/ALFA/Unique/paired_end_R1_on_plus_antisense.ALFA_feature_counts.tsv
e5959524a2daf35da9249fb313920315  results/samples/paired_end_R1_on_plus_sense/ALFA/Unique/paired_end_R1_on_plus_sense.ALFA_feature_counts.tsv
e5959524a2daf35da9249fb313920315  results/samples/paired_end_R1_on_minus_antisense/ALFA/UniqueMultiple/paired_end_R1_on_minus_antisense.ALFA_feature_counts.tsv
c406c1800d3690dd774aaa7e3c190523  results/samples/paired_end_R1_on_minus_sense/ALFA/UniqueMultiple/paired_end_R1_on_minus_sense.ALFA_feature_counts.tsv
c406c1800d3690dd774aaa7e3c190523  results/samples/paired_end_R1_on_plus_antisense/ALFA/UniqueMultiple/paired_end_R1_on_plus_antisense.ALFA_feature_counts.tsv
e5959524a2daf35da9249fb313920315  results/samples/paired_end_R1_on_plus_sense/ALFA/UniqueMultiple/paired_end_R1_on_plus_sense.ALFA_feature_counts.tsv
5e90c760710980f4f4866dbe9aa32c6c  results/samples/paired_end_R1_on_minus_antisense/ALFA/UniqueMultiple/paired_end_R1_on_minus_antisense.UniqueMultiple.minus.bg
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8e23d52d7f635d927e292174f33168eb  results/samples/paired_end_R1_on_plus_sense/ALFA/UniqueMultiple/paired_end_R1_on_plus_sense.UniqueMultiple.plus.bg
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8e23d52d7f635d927e292174f33168eb  results/samples/paired_end_R1_on_minus_sense/ALFA/Unique/paired_end_R1_on_minus_sense.Unique.minus.bg
5e90c760710980f4f4866dbe9aa32c6c  results/samples/paired_end_R1_on_minus_sense/ALFA/Unique/paired_end_R1_on_minus_sense.Unique.plus.bg
8e23d52d7f635d927e292174f33168eb  results/samples/paired_end_R1_on_plus_antisense/ALFA/Unique/paired_end_R1_on_plus_antisense.Unique.minus.bg
5e90c760710980f4f4866dbe9aa32c6c  results/samples/paired_end_R1_on_plus_antisense/ALFA/Unique/paired_end_R1_on_plus_antisense.Unique.plus.bg
5e90c760710980f4f4866dbe9aa32c6c  results/samples/paired_end_R1_on_plus_sense/ALFA/Unique/paired_end_R1_on_plus_sense.Unique.minus.bg
8e23d52d7f635d927e292174f33168eb  results/samples/paired_end_R1_on_plus_sense/ALFA/Unique/paired_end_R1_on_plus_sense.Unique.plus.bg
5e90c760710980f4f4866dbe9aa32c6c  results/samples/paired_end_R1_on_minus_antisense/STAR_coverage/paired_end_R1_on_minus_antisense_Signal.UniqueMultiple.str1.out.bg
8e23d52d7f635d927e292174f33168eb  results/samples/paired_end_R1_on_minus_antisense/STAR_coverage/paired_end_R1_on_minus_antisense_Signal.UniqueMultiple.str2.out.bg
5e90c760710980f4f4866dbe9aa32c6c  results/samples/paired_end_R1_on_minus_antisense/STAR_coverage/paired_end_R1_on_minus_antisense_Signal.Unique.str1.out.bg
8e23d52d7f635d927e292174f33168eb  results/samples/paired_end_R1_on_minus_antisense/STAR_coverage/paired_end_R1_on_minus_antisense_Signal.Unique.str2.out.bg
5e90c760710980f4f4866dbe9aa32c6c  results/samples/paired_end_R1_on_minus_sense/STAR_coverage/paired_end_R1_on_minus_sense_Signal.UniqueMultiple.str1.out.bg
8e23d52d7f635d927e292174f33168eb  results/samples/paired_end_R1_on_minus_sense/STAR_coverage/paired_end_R1_on_minus_sense_Signal.UniqueMultiple.str2.out.bg
5e90c760710980f4f4866dbe9aa32c6c  results/samples/paired_end_R1_on_minus_sense/STAR_coverage/paired_end_R1_on_minus_sense_Signal.Unique.str1.out.bg
8e23d52d7f635d927e292174f33168eb  results/samples/paired_end_R1_on_minus_sense/STAR_coverage/paired_end_R1_on_minus_sense_Signal.Unique.str2.out.bg
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8e23d52d7f635d927e292174f33168eb  results/samples/paired_end_R1_on_plus_sense/STAR_coverage/paired_end_R1_on_plus_sense_Signal.UniqueMultiple.str1.out.bg
5e90c760710980f4f4866dbe9aa32c6c  results/samples/paired_end_R1_on_plus_sense/STAR_coverage/paired_end_R1_on_plus_sense_Signal.UniqueMultiple.str2.out.bg
8e23d52d7f635d927e292174f33168eb  results/samples/paired_end_R1_on_plus_sense/STAR_coverage/paired_end_R1_on_plus_sense_Signal.Unique.str1.out.bg
5e90c760710980f4f4866dbe9aa32c6c  results/samples/paired_end_R1_on_plus_sense/STAR_coverage/paired_end_R1_on_plus_sense_Signal.Unique.str2.out.bg