**ZARP** ([Zavolan-Lab][zavolan-lab] Automated RNA-Seq Pipeline) is a generic RNA-Seq analysis workflow that allows
users to process and analyze Illumina short-read sequencing libraries with minimum effort. The workflow relies on
...
...
@@ -9,17 +9,17 @@ The workflow is developed in [Snakemake][snakemake], a widely used workflow mana
community.
According to the current ZARP implementation, reads are analyzed (pre-processed, aligned, quantified) with state-of-the-art
tools to give meaningful initial insights into the quality and composition of an RNA-Seq library, reducing hands-on time for bioinformaticians and giving experimentalists the possibility to rapidly assess their data.
Additional reports summarise the results of the individual steps and provide useful visualisations.
For a more detailed description of each step, please refer to the [workflow
documentation][pipeline-documentation].
tools to give meaningful initial insights into the quality and composition of an RNA-Seq library, reducing hands-on time for bioinformaticians and giving experimentalists the possibility to rapidly assess their data. Additional reports summarise the results of the individual steps and provide useful visualisations.
