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Commit 9d7eca2a authored by Alex Kanitz's avatar Alex Kanitz
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Merge branch 'validate_snakefile' into 'master'

Added sample fastq.gz paired-end input 1000 record files, adjusted dummy sample.tsv

See merge request zavolan_group/pipelines/rnaseqpipeline!6
parents f13b033c f492977d
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1 merge request!6added fastq testfiles
Pipeline #10014 passed
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sample fq1 fq2
LN18C_rep1 /Users/foivosgypas/Desktop/samples/BSSE_QGF_131557_HHK5FDRXX_1_7_1_LN18C_1_GAATGAGA_GAGGCATT_S1_L001_R1_001_MM_1.fastq.gz /Users/foivosgypas/Desktop/samples/BSSE_QGF_131557_HHK5FDRXX_1_7_1_LN18C_1_GAATGAGA_GAGGCATT_S1_L001_R2_001_MM_1.fastq.gz
LN18C_rep2 /Users/foivosgypas/Desktop/samples/BSSE_QGF_131558_HHK5FDRXX_1_7_2_LN18C_2_AGGCAGAG_AGAATGCC_S2_L001_R1_001_MM_1.fastq.gz /Users/foivosgypas/Desktop/samples/BSSE_QGF_131558_HHK5FDRXX_1_7_2_LN18C_2_AGGCAGAG_AGAATGCC_S2_L001_R2_001_MM_1.fastq.gz
HNRNPC_control_rep1 ../tests/input_files/GSM1502498_1.fastq.gz ../tests/input_files/GSM1502498_2.fastq.gz
HNRNPC_KD_rep1 ../tests/input_files/GSM1502500_1.fastq.gz ../tests/input_files/GSM1502500_2.fastq.gz
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