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Commit 9e979564 authored by Maria Katsantoni's avatar Maria Katsantoni
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Update filenames and md5 sums for tests

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1 merge request!102Change alfa output folder names
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tests/test_integration_workflow/expected_output.files
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...@@ -81,26 +81,26 @@ results/samples/synthetic_10_reads_mate_1_synthetic_10_reads_mate_1/synthetic_10 ...@@ -81,26 +81,26 @@ results/samples/synthetic_10_reads_mate_1_synthetic_10_reads_mate_1/synthetic_10
results/transcriptome/homo_sapiens/transcriptome.fa results/transcriptome/homo_sapiens/transcriptome.fa
results/alfa_indexes/homo_sapiens/75/ALFA/sorted_genes.stranded.ALFA_index results/alfa_indexes/homo_sapiens/75/ALFA/sorted_genes.stranded.ALFA_index
results/alfa_indexes/homo_sapiens/75/ALFA/sorted_genes.unstranded.ALFA_index results/alfa_indexes/homo_sapiens/75/ALFA/sorted_genes.unstranded.ALFA_index
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results/samples/synthetic_10_reads_mate_1_synthetic_10_reads_mate_1/ALFA/Unique/synthetic_10_reads_mate_1_synthetic_10_reads_mate_1.ALFA_feature_counts.tsv results/samples/synthetic_10_reads_mate_1_synthetic_10_reads_mate_1/ALFA/UniqueMappers/synthetic_10_reads_mate_1_synthetic_10_reads_mate_1.ALFA_feature_counts.tsv
results/samples/synthetic_10_reads_paired_synthetic_10_reads_paired/ALFA/UniqueMultiple/synthetic_10_reads_paired_synthetic_10_reads_paired.ALFA_feature_counts.tsv results/samples/synthetic_10_reads_paired_synthetic_10_reads_paired/ALFA/MultimappersIncluded/synthetic_10_reads_paired_synthetic_10_reads_paired.ALFA_feature_counts.tsv
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results/multiqc_summary/multiqc_data/multiqc_fastqc.txt results/multiqc_summary/multiqc_data/multiqc_fastqc.txt
results/multiqc_summary/multiqc_data/multiqc_cutadapt.txt results/multiqc_summary/multiqc_data/multiqc_cutadapt.txt
results/multiqc_summary/multiqc_data/multiqc_cutadapt_1.txt results/multiqc_summary/multiqc_data/multiqc_cutadapt_1.txt
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tests/test_integration_workflow/expected_output.md5
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...@@ -63,26 +63,26 @@ d41d8cd98f00b204e9800998ecf8427e results/samples/synthetic_10_reads_mate_1_synt ...@@ -63,26 +63,26 @@ d41d8cd98f00b204e9800998ecf8427e results/samples/synthetic_10_reads_mate_1_synt
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tests/test_integration_workflow_multiple_lanes/expected_output.md5
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