Merge branch 'dev' into 'master'

...nput_files/se_lane2/synthetic_split_lane2.mate_1.fastq.gz

tests/test_integration_workflow/expected_output.files

tests/test_integration_workflow/expected_output.md5

tests/test_integration_workflow/test.local.sh

tests/test_integration_workflow/test.slurm.sh

...t_integration_workflow_multiple_lanes/expected_output.md5

tests/test_integration_workflow_multiple_lanes/test.local.sh

tests/test_integration_workflow_multiple_lanes/test.slurm.sh

...est_scripts_labkey_to_snakemake_table/expected_output.md5

tests/test_scripts_prepare_inputs_labkey/expected_output.md5

tests/test_scripts_prepare_inputs_labkey/test.sh

tests/test_scripts_prepare_inputs_table/expected_output.md5

tests/test_scripts_prepare_inputs_table/input_table.tsv

tests/test_scripts_prepare_inputs_table/test.sh

workflow/rules/paired_end.snakefile.smk

workflow/rules/single_end.snakefile.smk

workflow/scripts/zarp_multiqc_config.py