> ![zarp_logo][zarp-logo] **ZARP** ([Zavolan-Lab][zavolan-lab] Automated RNA-Seq Pipeline) is a generic RNA-Seq analysis pipeline that allows users to process and analyze Illumina short-read sequencing libraries with minimum effort. The pipeline relies on publicly available bioinformatics tools and currently handles single or paired-end stranded bulk RNA-seq data. The workflow is developed in [Snakemake][snakemake], a widely used workflow management system in the bioinformatics community.
**ZARP** ([Zavolan-Lab][zavolan-lab] Automated RNA-Seq Pipeline) is a generic RNA-Seq analysis pipeline that allows users to process and analyze Illumina short-read sequencing libraries with minimum effort. The pipeline relies on publicly available bioinformatics tools and currently handles single or paired-end stranded bulk RNA-seq data. The workflow is developed in [Snakemake][snakemake], a widely used workflow management system in the bioinformatics community.
