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e791ce60

Commit e791ce60 authored 4 years ago by Dominik Burri

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add --no-hooks for CI tests, mark output files of salmon for multiqc, adjust files for md5 check.

parent 06e80ae5

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tests/test_alfa/test.sh 1 addition, 0 deletions

tests/test_alfa/test.sh
tests/test_create_dag_image/test.sh 1 addition, 0 deletions

tests/test_create_dag_image/test.sh
tests/test_create_rule_graph/test.sh 1 addition, 0 deletions

tests/test_create_rule_graph/test.sh
tests/test_integration_workflow/expected_output.md5 0 additions, 18 deletions

tests/test_integration_workflow/expected_output.md5
tests/test_integration_workflow/test.local.sh 1 addition, 3 deletions

tests/test_integration_workflow/test.local.sh
tests/test_integration_workflow/test.slurm.sh 1 addition, 0 deletions

tests/test_integration_workflow/test.slurm.sh
tests/test_integration_workflow_multiple_lanes/expected_output.md5 0 additions, 18 deletions

...t_integration_workflow_multiple_lanes/expected_output.md5
tests/test_integration_workflow_multiple_lanes/test.local.sh 1 addition, 0 deletions

tests/test_integration_workflow_multiple_lanes/test.local.sh
tests/test_integration_workflow_multiple_lanes/test.slurm.sh 1 addition, 0 deletions

tests/test_integration_workflow_multiple_lanes/test.slurm.sh
workflow/rules/paired_end.snakefile.smk 15 additions, 1 deletion

workflow/rules/paired_end.snakefile.smk
workflow/rules/single_end.snakefile.smk 15 additions, 1 deletion

workflow/rules/single_end.snakefile.smk

with 37 additions and 41 deletions

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