- Aug 23, 2021
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Maciej Bak authored
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- Jun 12, 2020
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Alex Kanitz authored
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- Mar 19, 2020
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- Feb 24, 2020
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- compile Salmon gene and transcript count summary tables across all samples in workflow run - add `pandas` to `install/environment.dev.yml` - update rule graph and DAG images
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- Feb 18, 2020
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Alex Kanitz authored
- add 3 separate Conda environment files for installing - essential dependencies without Singularity (most users) - essential dependencies including Singularity (root users on Linux only) - non-essential dependencies (required for tests etc.) - install Python dependencies via `pip` _within_ Conda environment to avoid #56 - update Conda-based installation instructions - describe usage of different environment files - add supported OS versions (macOS not yet added, because only installation works) - update CI config to use same setup (based on Miniconda Docker image)
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