Create scripts for merging and plotting TIN scores

"We calculate TIN scores with a containerized in-house script. MultiQC have a limited support for external tools/data. The most reasonable way for now would be to include a .png with TIN score boxplots, generated by another scripts of ours. I don't think it makes sense to prepare a separate container though, so how about I write a simple scripts that generates boxplots, we put it under the same TIN container we already have for TIN calculation and I add a rule with plot generation to Snakefile?"

I would need to write two scrips:

  • merge TIN tables, as these are calculated separately for every file
  • Create boxplots from the merged table

I think these two scripts should be placed in the same container as the TIN score calculation since these are highly-related, consecutive operations. Therefore we would have an encapsulated functionality: "TIN scores".

@kanitz @zavolan @gypas Let me know what do you think

Edited by BIOPZ-Bak Maciej