Skip to content
Snippets Groups Projects

Add biocontainers image for merge_kallisto.R

Merged BIOPZ-Gypas Foivos requested to merge feature/biocontainers_merge_kallisto into dev
1 file
+ 3
3
Compare changes
  • Side-by-side
  • Inline
+ 3
3
@@ -944,7 +944,7 @@ rule kallisto_merge_genes:
threads: 1
singularity:
"docker://zavolab/merge_kallisto:0.6"
"docker://quay.io/biocontainers/r-merge-kallisto:0.6--hdfd78af_0"
shell:
"(merge_kallisto.R \
@@ -1025,7 +1025,7 @@ rule kallisto_merge_transcripts:
threads: 1
singularity:
"docker://zavolab/merge_kallisto:0.6"
"docker://quay.io/biocontainers/r-merge-kallisto:0.6--hdfd78af_0"
shell:
"(merge_kallisto.R \
@@ -1118,7 +1118,7 @@ rule pca_kallisto:
threads: 1
singularity:
"docker://zavolab/zpca:0.8.3-1"
"docker://quay.io/biocontainers/zpca:0.8.3.post1--pyh5e36f6f_0"
shell:
"(zpca-tpm \
Loading