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zavolan_group
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ZARP
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!87
Add biocontainers image for tin-score-calculation
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Add biocontainers image for tin-score-calculation
feature/biocontainers_tin-score-calculation
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BIOPZ-Gypas Foivos
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feature/biocontainers_tin-score-calculation
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3 years ago
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Add biocontainers image for tin-score-calculation. Fixes
#170 (closed)
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@@ -698,10 +698,10 @@ rule calculate_TIN_scores:
threads: 8
singularity:
"docker://
zavolab
/tin
_
score
_
calculation:0.
2.0-slim
"
"docker://
quay.io/biocontainers
/tin
-
score
-
calculation:0.
4--pyh5e36f6f_0
"
shell:
"(
tin_score_
calculati
o
n.py \
"(calculat
e-t
in.py \
-i {input.bam} \
-r {input.transcripts_bed12} \
--names {params.sample} \
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