Skip to content
GitLab
Explore
Sign in
Primary navigation
Search or go to…
Project
Z
ZARP
Manage
Activity
Members
Labels
Plan
Issues
Issue boards
Milestones
Wiki
Code
Merge requests
Repository
Branches
Commits
Tags
Repository graph
Compare revisions
Snippets
Build
Pipelines
Jobs
Pipeline schedules
Artifacts
Deploy
Releases
Model registry
Operate
Environments
Monitor
Incidents
Analyze
Value stream analytics
Contributor analytics
CI/CD analytics
Repository analytics
Model experiments
Help
Help
Support
GitLab documentation
Compare GitLab plans
Community forum
Contribute to GitLab
Provide feedback
Keyboard shortcuts
?
Snippets
Groups
Projects
Show more breadcrumbs
zavolan_group
pipelines
ZARP
Wiki
Home
Changes
Page history
New page
Templates
Clone repository
Update home
authored
5 years ago
by
Alex Kanitz
Hide whitespace changes
Inline
Side-by-side
Showing
1 changed file
home.md
+29
-0
29 additions, 0 deletions
home.md
with
29 additions
and
0 deletions
home.md
View page @
be44c2f1
# Rhea wiki
## Discussion points
*
What is the user story?
*
What are the defined use cases?
## Road map
*
Test current version with real-world data
*
In the meantime: Plan future development
*
Plan upstream API
*
Interface with SRA
*
Derive library params from data
*
Plan user interaction (CLI, UI, website)
*
Prepare for integration into web service?
*
Discuss code organization, especially with respect to extending functionality
*
Tools for individual samples
*
Tools for multiple samples
*
Tools for comparing groups of samples
*
Discuss reuse and storage of results
*
Minimize storage
*
Minimize reruns
*
How to determine whether samples have been run (database, folder structure, hashes)
*
How to pass data between consecutive stages/pipelines (compare code organization)
*
Plan downstream API
*
How to extend MultiQC report?
*
Snakemake report?
*
Directory and file naming structure
*
Prepare for integration into web service?
*
Overall code organization
*
How to coordinate different pipelines
*
How to deal with interactive parts in between
\ No newline at end of file
This diff is collapsed.
Click to expand it.