reorganising and adding cli which doesn't work - no clue there

Archive/CONTRIBUTING.md

Archive/PrimingSitePredictor_main_1.0.0.py

Archive/cli-primingsitepredictor/.DS_Store

Archive/cli-primingsitepredictor/.gitignore

Archive/cli-primingsitepredictor/install.sh

Archive/cli-primingsitepredictor/pycli/__init__.py

Archive/cli-primingsitepredictor/pycli/__main__.py

Archive/cli-primingsitepredictor/pycli/classmodule.py

Archive/cli-primingsitepredictor/pycli/funcmodule.py

Archive/cli-primingsitepredictor/setup.py

Archive/my_file1

Archive/my_file2

In -and- Output examples/Example_GTF_Output.GTF

In -and- Output examples/RIBlast output example.txt

...ples/Yeast testfiles/Archive/S288C_YKL166C_TPK3_coding.fa

In -and- Output examples/Yeast testfiles/Archive/dbRNA.fa

In -and- Output examples/Yeast testfiles/Archive/queryRNA.fa

In -and- Output examples/Yeast testfiles/dbRNA_test.fa

In -and- Output examples/Yeast testfiles/queryRNA_test.fa

README.md