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Commit b9889fb4 authored by Michael Sandholzer's avatar Michael Sandholzer
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Merge branch 'test_functions' into 'main'

Test functions

See merge request !28
parents c2a941a1 aae07c8e
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1 merge request!28Test functions
pytest
coverage
flake8
flake8-docstrings
mypy
pylint
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......@@ -7,3 +7,21 @@ sequencer = ReadSequencer()
def test_chunksize():
assert sequencer.chunk_size == 10000
def test_run_Input():
assert ReadSequencer(
fasta="./tests/fasta_testfile/50_seqs_50_1000_bp.fasta",
output="./tests/fasta_testfile/",
read_length=1000,
chunk_size=10000,
)
def test_run_Random():
assert ReadSequencer(
output="./tests/fasta_testfile/",
read_length=1000,
chunk_size=10000,
)
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