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zavolan_group
tools
Read sequencer
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!22
chore: added type hints in modules
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chore: added type hints in modules
type_hinting
into
main
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Merged
Christoph Harmel
requested to merge
type_hinting
into
main
2 years ago
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read_sequencer_package/fasta_testfile/result.fasta
+
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1|random sequence|A: 0.25|C: 0.25|G: 0.25|T: 0.25|length: 481 bp
tgagcactcggtgccaagggcggggatacacagatggttggctgatacaa
2|random sequence|A: 0.25|C: 0.25|G: 0.25|T: 0.25|length: 495 bp
ctgaatcaggtgtaggttctttttacgtcgtttaaggagctacacggtat
3|random sequence|A: 0.25|C: 0.25|G: 0.25|T: 0.25|length: 193 bp
acttcagtactggaaggatctaggaaccattaatgcgagtgtggtgacgc
4|random sequence|A: 0.25|C: 0.25|G: 0.25|T: 0.25|length: 625 bp
acgtctggagcgtgggttgacccctgtacatggttctttccggatcctta
5|random sequence|A: 0.25|C: 0.25|G: 0.25|T: 0.25|length: 845 bp
agagcgtacggcgcgcatcgtataccctacgagggcggcgtgtggaggaa
6|random sequence|A: 0.25|C: 0.25|G: 0.25|T: 0.25|length: 703 bp
tgcagtcgatgtgctattcgttttaggcagtctacgcgcttagtaactcc
7|random sequence|A: 0.25|C: 0.25|G: 0.25|T: 0.25|length: 243 bp
actctttagaatgggtttcactaatagtacgtgcatacaatttcgtcaga
8|random sequence|A: 0.25|C: 0.25|G: 0.25|T: 0.25|length: 863 bp
attggcccggtccaggacagagccttatattgctactggtatgagaaccg
9|random sequence|A: 0.25|C: 0.25|G: 0.25|T: 0.25|length: 494 bp
aagcgaaactcctagaacttcccatcaggcaatcgtgtcccacgaagcac
10|random sequence|A: 0.25|C: 0.25|G: 0.25|T: 0.25|length: 86 bp
atcctagcgccaaagatttactgttatggggtcgacgaacactagccgat
11|random sequence|A: 0.25|C: 0.25|G: 0.25|T: 0.25|length: 360 bp
cgcctgagggtcctaaatctgacgtatgatcgaagagattggaaggtccc
12|random sequence|A: 0.25|C: 0.25|G: 0.25|T: 0.25|length: 140 bp
gaattcctggggatttactcacccccgaggcggacaagatttccagctgg
13|random sequence|A: 0.25|C: 0.25|G: 0.25|T: 0.25|length: 832 bp
aatactctcgttgaagcgtcggacagtaaagtgagagatttcggcccacg
14|random sequence|A: 0.25|C: 0.25|G: 0.25|T: 0.25|length: 296 bp
atcggggtgcgaaatcccctgagctggttgactacatacgtaaccacgtt
15|random sequence|A: 0.25|C: 0.25|G: 0.25|T: 0.25|length: 515 bp
accttcaatttgttcgcccgggacaagtagaaattactgtaaactaaact
16|random sequence|A: 0.25|C: 0.25|G: 0.25|T: 0.25|length: 820 bp
ccggctcaatcctgtagaaccgcgtacaacacacccaagctataccgcac
17|random sequence|A: 0.25|C: 0.25|G: 0.25|T: 0.25|length: 791 bp
attgttagggcctgtccggaaaagatcaacggaagatattcaccagcacc
18|random sequence|A: 0.25|C: 0.25|G: 0.25|T: 0.25|length: 328 bp
accgattacaggcagtcggccttgtccgctcgtatatccagggatgttcc
19|random sequence|A: 0.25|C: 0.25|G: 0.25|T: 0.25|length: 249 bp
ggagtggaaaattctgtagtccgttggcggcgaccgcaaaccagaataat
20|random sequence|A: 0.25|C: 0.25|G: 0.25|T: 0.25|length: 440 bp
atcttaaacagcccaatcggctcgccgaccaatttcccgcttcacagtac
21|random sequence|A: 0.25|C: 0.25|G: 0.25|T: 0.25|length: 840 bp
cataactcgtgagtggccctgtacaagtcattgcatcacaatccttgcaa
22|random sequence|A: 0.25|C: 0.25|G: 0.25|T: 0.25|length: 234 bp
caccgcgaaagtgactcagttttcccggtcttatcacggtcgttgtcgtc
23|random sequence|A: 0.25|C: 0.25|G: 0.25|T: 0.25|length: 917 bp
atcaagtgattacctggtaacccgccgctcttgcagtgttcaccctttgt
24|random sequence|A: 0.25|C: 0.25|G: 0.25|T: 0.25|length: 676 bp
cacacggcatcgcaaagcgagctatccagagatgatacatgtggttgaag
25|random sequence|A: 0.25|C: 0.25|G: 0.25|T: 0.25|length: 870 bp
ctgatcaccaatagcttgcgcttaacacacgcgccttacaattatatgac
26|random sequence|A: 0.25|C: 0.25|G: 0.25|T: 0.25|length: 751 bp
gggtgcgttatggggactaaagactgttactaccggtactccgccttata
27|random sequence|A: 0.25|C: 0.25|G: 0.25|T: 0.25|length: 574 bp
gtactgcaccttgcactgctatctacaatgccgagggtcgccctagtgct
28|random sequence|A: 0.25|C: 0.25|G: 0.25|T: 0.25|length: 169 bp
agctccctaaacaacacccgcgtaaaaccttcagttatggtgccgactaa
29|random sequence|A: 0.25|C: 0.25|G: 0.25|T: 0.25|length: 408 bp
tgcagtgatgcatcgataagaccgcatagttacctccttacaggtgacgc
30|random sequence|A: 0.25|C: 0.25|G: 0.25|T: 0.25|length: 52 bp
caaagcgattcgggttaacgcacttaagagttcgacgtaggttagtcccc
31|random sequence|A: 0.25|C: 0.25|G: 0.25|T: 0.25|length: 581 bp
tgctctgacgtgtaagcgccttcgataacgtctttgcagcgccccacaaa
32|random sequence|A: 0.25|C: 0.25|G: 0.25|T: 0.25|length: 249 bp
gcggaactacctctctaagaccgcacaacaagtgtagtagatgaagatca
33|random sequence|A: 0.25|C: 0.25|G: 0.25|T: 0.25|length: 297 bp
gccctcgcgccagcttacttttagaaaacatcgaccggtaagagatacct
34|random sequence|A: 0.25|C: 0.25|G: 0.25|T: 0.25|length: 573 bp
gcctaggggtcttgaccacagggagtacgagcattgatcattggagcagg
35|random sequence|A: 0.25|C: 0.25|G: 0.25|T: 0.25|length: 559 bp
gaaaaagtcgccccattcagttacaatcgtcttcagaagccagctcggtt
36|random sequence|A: 0.25|C: 0.25|G: 0.25|T: 0.25|length: 187 bp
ctaagtccttatctatgatgcatctttcgttactgcgacaatatccgaga
37|random sequence|A: 0.25|C: 0.25|G: 0.25|T: 0.25|length: 549 bp
ttcatatggggatttggaatcgggtttgtgcggaatatgcccacgagact
38|random sequence|A: 0.25|C: 0.25|G: 0.25|T: 0.25|length: 916 bp
gtggcctaccataaatcaatttgggttaacgctctttgatctacgcacta
39|random sequence|A: 0.25|C: 0.25|G: 0.25|T: 0.25|length: 848 bp
accccggtcgctttggccggtcgtagccctaatcaattctgttcgtatca
40|random sequence|A: 0.25|C: 0.25|G: 0.25|T: 0.25|length: 289 bp
agagcaaaagaaagtctgctccgcgtgacacacttgctcgttgtagtaac
41|random sequence|A: 0.25|C: 0.25|G: 0.25|T: 0.25|length: 642 bp
ctggggaatgaccgtaccgatctaattccccgtcgaaaaacttatgacgc
42|random sequence|A: 0.25|C: 0.25|G: 0.25|T: 0.25|length: 993 bp
gcaagaagccaaaaaccttgcaggaggtcatttaagtttacccgcgcata
43|random sequence|A: 0.25|C: 0.25|G: 0.25|T: 0.25|length: 473 bp
ggttgtccaggcgcgagcaagtagctgactcgctaatcttaacgagtatt
44|random sequence|A: 0.25|C: 0.25|G: 0.25|T: 0.25|length: 272 bp
gtagaacttgttccccatggacaatgctagttccgttaatgccaggtatt
45|random sequence|A: 0.25|C: 0.25|G: 0.25|T: 0.25|length: 860 bp
aaaagcatcactctaacgacgctaccgtctgaatagatcaagattgctat
46|random sequence|A: 0.25|C: 0.25|G: 0.25|T: 0.25|length: 884 bp
aagcctctacaggctctgcggtttggctttacttaacggtgagtcaggaa
47|random sequence|A: 0.25|C: 0.25|G: 0.25|T: 0.25|length: 888 bp
gcgccttgaagaggcgaggtctaaaggcaaaaatttagatccgccctatg
48|random sequence|A: 0.25|C: 0.25|G: 0.25|T: 0.25|length: 588 bp
catcaagatgggttacgtaggaccgagattcagtctctgggttagagccg
49|random sequence|A: 0.25|C: 0.25|G: 0.25|T: 0.25|length: 626 bp
taacctcagtctcgttcccccctcggtagttcggacccttattcgcttat
50|random sequence|A: 0.25|C: 0.25|G: 0.25|T: 0.25|length: 214 bp
taactgtcggtcactgctcatcccgactagttcggctcactagacttact
0: length 103 nt
ACGCCCTATGTCAGAGTGGTGTTAGTGCACAATTCATTCCGATATGCGAA
1: length 35 nt
ATAACGAGCGCGAGCCCTTAACGGGCAGGACTGCCGACTCACACCTTAAT
2: length 61 nt
GGTCTCATAAGCACTTCGGGTACATCCTCCTAAATGGGCCGCGACTTAGG
3: length 54 nt
TAGGTCTCGGATACGAGATATAACCGTAGCATGGGAGTGACACCCATGCC
4: length 64 nt
TCTGCGATACCCAATTTAGGGCATGGCATAAGGCCCGGCGGGTATTTCCG
5: length 85 nt
TTGTTAAGCGTGTTGGTAGCGCCCCCAAATTGTCCCAACTGGGCCACACC
6: length 53 nt
ATAGTACAAGTTAGACCTCATGCATTGAGCTGCCCGGTTCGGACCTTAAT
7: length 27 nt
TAAAATATTAAGGATAGCCGGAACGCGCTGGCGACTGACGACACTACACG
8: length 25 nt
TAGATTCCAGGGAATGACGTCACACCGTTCCGTATATCAGCGGCGCGGAA
9: length 52 nt
GGTGCACCTATTAACAGAGTGACTTTGGGGGAATCACTTATTCGCATATA
10: length 41 nt
AACGACAAGCTGAACGAGCTCTGGCGGCTACGCAGTGTTCGCGCAAGCGA
11: length 106 nt
GTAATAAACTAAACATCAGCTGAGGCGTCCGACCACTGCATCTTTTGTTG
12: length 5 nt
GTAATATGGTATAGCTCGACCCTCGTACAACGGGGGTCAGACAGCGTTGC
13: length 49 nt
TTACTTTGCACGCATGCATGGAGGCACCATGAAAGACGGGAAGCGGCTAA
14: length 22 nt
GCAAGGGGTTTGAGGGAGCAACGTAAGATCAGAGATAACAGTCTCAAGAG
15: length 109 nt
AATTGAAGTCAGCAAAGAATTGGGATTGCTGGAAGCAACACGGACACGTT
16: length 43 nt
GAACCATTCTAAACAGCACCACCCGCATCCCGCTTTGCGCAGCAGCCACT
17: length 85 nt
ATGTCTCACAGGGGAGGTCTCCAGGCTTCTACCAAGTTCCCAATTCCATG
18: length 16 nt
ATCTCATCAATTATGTTGTACACCTGCTCGTTCTAACTTGCAGACTGCAT
19: length 52 nt
GAGTATCGCAGTATACTGTTGGCGGACATTCCAGAATATTGGTATTCAGC
20: length 2 nt
ATATAGCTACCCCAGATTGTCTTAACGAGTCCCGCACCCCCCACCAAGAT
21: length 13 nt
GTATTTACCTGCCCACTAGTACAAGTCCCCGAACCTTAGCAATCCTAAGT
22: length 64 nt
TGGCCGTTTCAGAAGGATTCCTGCCCCTGTGATGAGTCACGTGGAGACAG
23: length 59 nt
CGAGGAGAGCTGTAAAATACTGCTGCCTGCTACATTGGGGCTTGGGTCTC
24: length 82 nt
GCACAGTAGCGAGTGACTCGGTTACTATGTGTTGCTGACTTTATATGTGC
25: length 6 nt
GAGTAAAGCTGAAACACCGAACCGGCAGTTAGAGCTAGTGGATTTTCTTA
26: length 87 nt
AGACATTTTCGGAACCAATGATCTTGTTGGAGTTGAGAGGCCGAACCAGG
27: length 136 nt
AACACGGTAATATCAGGTCGGCCTTAGTCACTTCGGAATTGGAGTTAGTA
28: length 68 nt
CACCGGTAGCTGAATGTAACGAATCTACGTTGACACGGTTAAAGGGATAT
29: length 84 nt
AGATTGTCATGGACTGACGGAGAACACCGTGCTTAAAGTGGAATAATGTG
30: length 51 nt
CGGCAAGGAGGAGGCTACTGACCAATCAGACAAACGTTCATGGCTAGAGA
31: length 51 nt
AGCAGCCGCTCAACTGTGACGTCGGCTGAGTCTACCAGCCCTCAGACTAC
32: length 73 nt
TCCGATCTTATAGTAGTGATCCTGATGGAACAATAACTGACCCAGTAAAG
33: length 58 nt
ACGTTTTATTGTACCTAGGTGTGGCACCATGAAAGGCAGGAGGCCCACCG
34: length 28 nt
AATCCGCAATCGTGCTACGCATTTTCCAGACAATATTTCGAGGTTACCGC
35: length 13 nt
AACACGAGGCCCTCTCGACGCTGCTATTTAACAGCGCGTGCCTATTGAAA
36: length 2 nt
ATACCGAAACTTACTAGTTGTGACAGCGGATTCCAAACTGCGGGTGAATA
37: length 71 nt
GTGAGGAGTACTCGGCACCGGGAACGTAGTAATGTGCTCTGATCCACTCT
38: length 46 nt
CGAACGTAAATAAGTCTGCTGCTGCCTCAGCAGAGGGATGGGAGGGGTCT
39: length 48 nt
CGCAAGAGTGTCGAGCTGGCAGACGCGTATTGCCTTTATATCCGTGAAAC
40: length 63 nt
TGACAAACATAAGTTTGTCGCCCGTTTCCACATAGTAGAATTCATTAGAA
41: length 11 nt
AGAAATAGTACGTAGTGTTGGCTGTGAATATTCGGAGATAAGGACTCATT
42: length 68 nt
GGTTCACAAATTGTCATAGATCATCGTGGTACGACGGGCGATCTTATTTC
43: length 7 nt
CGAGCGTGATGACGTAATGGAGTGAATAAGGAGTGCGAAATGGTGCGTTT
44: length 84 nt
TGGGACGATCATTCCCCCTGACCTTACGTACAATGCAATTGCGAGTGGCT
45: length 23 nt
TTGTACTTACGGCTTAAATTGCACAGAAGGGGTTCTCCGGAAGATAACTA
46: length 58 nt
GGCCCTTCGGTGCAGTCGGCCTAGGTATCAAGCTCGCCTGCCCGTGTTAT
47: length 50 nt
TATCGTGGTTATGTGCGGACCGCCTGATATTACAGCTGATGTGAGGGCAA
48: length 63 nt
TCTGCTAGGGATCCACTCCTGGGTCATTATTAAGCACTTACGGCCTGAGA
49: length 48 nt
GGAGAATTCGCGGCATAAGATCTCCATACGGGTAGTATGTGCCACTATTA
50: length 64 nt
AATGCGTACGGCCCAAAAACCTTCAGGATTACCATGAACCCGTAACTCAA
51: length 41 nt
AGTCATATAATGATTGAGTTCCCTCAACCCTCCGGACGTAAACACTCCGG
52: length 44 nt
TCCAGATGGCCTGGCAATCAGGTGTTGACGGGAACCGCACCCCTGCTGCT
53: length 62 nt
AGGTTGTCTGAATCACTCGGGAGACTTCCCCGCACGATATCGGCACCTGA
54: length 73 nt
CCGTACGGAACATCCTGCAGCTTCGCCCGGTCGAGAAGAAGGTAGAGATA
55: length 39 nt
TGCGCGGCGGACTCTGTCATTTATGACCTGCTTGAACGATGAGTGGGCCA
56: length 88 nt
CGATCCATAGGGCACGCTAGTTTGCATTTTAAGGAGTGCCAATTACGAGG
57: length 117 nt
TATTGCGTCCGTTGCCTGCTCCATCCGTTGCACTATGCCATAAGGCAACA
58: length 67 nt
TTAACGCACGATCAACGGTTCATAATCTGCGGTGATCCCAGAGCTCTACA
59: length 84 nt
CTGACCCTCGATGTGTTTAATAGTTGTATTTCGGCCCCAGTAGGCTCGAC
60: length 71 nt
CTGTCAGATGCGCATGTTCGTGGTCCATTGTCAGCCAAATTAAAGGTTGC
61: length 102 nt
TACATGCTCATATGAACTGACATTGAGTGGAAGGTAGCGACCGCGAGGTT
62: length 66 nt
ACATGATCTTTGTCGAATACTCAAAATGCACAGTGCCTAACTATTTGGGT
63: length 22 nt
GTCACGACACGCATCTACACTAAACAGCACCACATGTTAGAGATGAGATC
64: length 46 nt
CGTGGTCGTGAAGACCCACTATATTAGCAAGAGTCGCGATAGATGGGTGT
65: length 78 nt
CTAGGTAATTTTGAGAGACACCCCGACGCACGGATGTTCCGTACAAAGAT
66: length 32 nt
CAGTCTGAATGTATCAACTAAGAGAATCGTACGAAAATAGACCTAATCGA
67: length 42 nt
GCTCCGCACACTAGATAGCTGATGCCCACATACTCATTCATTATTCGATG
68: length 49 nt
GTCTGAACCAGACACGCACTACGGCTAGCACCTATCCTTATCCTAAAACG
69: length 41 nt
GAGTTACGACCGGACGGGTTGTTAGGTCACCCCGGAATCAGACGATTTAC
70: length 29 nt
GTAGGCCAACGCGAACTACTCCTCCCGCCCACAGTCTAGACTAAGCGTTG
71: length 94 nt
GGTTTAGACTGTCTGCAACTATGTTACTGGATATACCTAATGACAGGGGT
72: length 48 nt
TAAGAATGTTATTGGGCGGTAGCTTACTCTATTGGAATTGAGAAAATGTA
73: length 63 nt
CTAGTATGTTTTATTGGATGCTTGAGGTAGGAATAATCACATCGGGCCGA
74: length 70 nt
ACAAACCTCCTCCCCGGCGACGGGCAACGCCCGCATTGCAACATGCAAGA
75: length 58 nt
GGCTCCATTTCGCTACCCTCTCCCCTAAATCAGGTCCGCGGAGTTGTCGT
76: length 98 nt
ACATACCTATGCCTCAGATCGGTTCGGCTCTTGAGGCGACACCCGTGATA
77: length 34 nt
TTAGAAAGGAACTCATTTTAAGCAAGTTATGCCAGGTTAGCCCGCCCTGG
78: length 48 nt
AAGGCTCGCCGTGACCAGTAGTGCGCAACCTTTCAAGCCGTGTAATATTT
79: length 51 nt
CCTTAAGGGTGGTTTGCACCGTAAAGACCCTCTCTTCCACTTTCCCCGAA
80: length 30 nt
GCCTCGACGTGCCGGACGATGGGCGCTGATCGAAAGTCCATTGTCCCCCT
81: length 14 nt
AGGGCAGTGTACACACACGGCAAGGGTTGCGATGGGTAGAGGCTAAGACG
82: length 39 nt
AATGGGACTTAGTAAACAGGCTGGCCGCCTAGACTGTGTGTGAATGCCCA
83: length 29 nt
AGCTTGGACTTAGAGAAAATCAGTCTACAAGACATAGGCTTTAAAGAGGA
84: length 15 nt
ACGGAAAGTAAGTCTCTCGTCCCTGGTTAAAGGGTCAGTCCCTCCCACCT
85: length 20 nt
CCCAGAGCAAACTGGACCTCCCACCGGCAGATCATCGTTTATTATTATAC
86: length 64 nt
CGTGGCCAGTACATGCTGATGATCCCTATTACAGACCTCGCGTGTTGAGA
87: length 52 nt
GTTAGGCTGTACTGAATACCATGAGCATGTGGGTAGGTTGTACTGGAACC
88: length 60 nt
CGCCGGGCTCCCCGAAGTATAGAGCCAGCGGTTAAATAACTTATCTGATC
89: length 32 nt
CTTGTACGTCGAGTATGAGAGGGGTTACACTTTCTGCTTGCTAAGTTCAG
90: length 14 nt
AAACAGATTAATAACGTAATACCCCCGCTCTACGCCCCTGCATTACGGTT
91: length 21 nt
GTAGTTCGTAGCAGGGGATTGTCATAAATCAGCGCCTGATGGGAAGCGTT
92: length 47 nt
TGCCCAGATGTAACACATCCCGGCCCATTCTGGTAACTCCGTTTCTGGGT
93: length 47 nt
AATTAAGGGGTTGTCAAACCGGCCACTTTTGAACAATGGGCTTCGCCGCC
94: length 42 nt
TTCAACCTTTACGATGCAAACATAGACAAACTTGGACGTATTCGGACCCT
95: length 35 nt
GGCGCTTAGTGGAATGCCCCCCCGTATGCAGCATCGAGTATTCCGTAGCG
96: length 54 nt
TTGCTGATCTTTCGAATTTGGATCTGGGATTTTGCCAGATAGCGCCCGTA
97: length 34 nt
TACGTAGATATTTTCAGGAGGCACTGAACAGCCCAGAGCCTCCATCGGGC
98: length 15 nt
ATTGCGCAGGTATGGCTCAGAGACACAGTATACTATTACCTTCCCGCAAC
99: length 42 nt
CGATCTGGCATCGGCATCCGAGTAGCCCCTACGTATGGCTTTGCCCAACA
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