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Transcript sequence extractor
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zavolan_group
tools
Transcript sequence extractor
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Samuel Mondal
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2 years ago
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sequence_extractor/cli.py
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import
argparse
import
logging
from
pre_bedtools
import
exon_extraction_from_gtf
from
exon_concatenation
import
exon_concatenation
from
polyA
import
polyA_addition_to_fasta_list
from
list_to_file
import
list_to_file
from
poly_a
import
poly_a_addition_to_fasta_list
parser
=
argparse
.
ArgumentParser
(
prog
=
'
transcript_sequence_extractor
'
,
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