Feature/homework 2022 11 02

• add license
• refactor command-line interface
• create package

src/main.py

-import argparse
-from pathlib import Path
-
-if __name__ == "__main__":
-    parser = argparse.ArgumentParser()
-    parser.add_argument("--transcripts", type=str)
-    parser.add_argument("--annotation", type=str)
-    parser.add_argument("--prob_inclusion", type=float)
-    args = parser.parse_args()
-
-    input_transcripts_file = args.transcripts
-    input_annotations_file = args.annotation
-    prob_inclusion = args.prob_inclusion
-    input_transcripts_path = Path(input_transcripts_file)
-    input_annotations_path = Path(input_annotations_file)
-    output_transcripts_file = "generated_" + input_transcripts_path.stem + ".csv"
-    output_annotations_file = "generated_" + input_annotations_path.name