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zavolan_group / pipelines / ZARP
Apache License 2.0General purpose Snakemake RNA-seq analysis workflow
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zavolan_group / pipelines / mirflowz
MIT LicenseArchived 0Updated -
zavolan_group / testing / Cron-CD
Apache License 2.0Updated -
imcf / myosoft-imcf
GNU General Public License v3.0 onlyimcf-adaptation of Myosoft, a Fiji script that identifies muscle fibers in images of sections
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imcf / Brain volume analysis
GNU General Public License v3.0 or laterUpdated -
TBRU / pathways
MIT LicensePathways allows you to compute importance scores for a a list of metabolic pathways.
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schwede / ma-wilkins-import
MIT LicenseTools to import models of the Wilkins group (Tara) to ModelArchive
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imcf / noisee
GNU General Public License v3.0 onlyAn easy-to-use ImageJ macro for measuring SNR (signal-to-noise ratio) of light microscopes.
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Jean-Guillaume Piccinali / Mirror Test
GNU General Public License v3.0 or laterUpdated -
This project contains all scripts and descriptions to enable the execution of a streamlined pipeline that processes A-seq2 read libraries up to the reporting of individual and clustered 3' end processing sites.
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Jean-Guillaume Piccinali / SPH-EXA_mini-app
MIT LicenseUpdated -
Fork of the cathsm-server repo (https://github.com/CATH-SWISSMODEL/cathsm-server) for the tutorial "Beyond the usual Docker tutorial - Web apps & CI" at [BC]^2 Conference 2021
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imcf / python-imcflibs
GNU General Public License v3.0 only๐ โ ๐ฉ ๐ง A collection of commonly used Python helper functions.Topics: pythonArchived 0Updated -
โ ๐ ๐ฌ Package for processing metadata from various light-microscopy related data formats.Updated