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Data integration and annotation workflows

The projects implements a simulation of single cell RNA sequencing (scRNA-seq), accounting for some common sources noise that complicate the analysis of the resulting data.

Run the AlphaFold2 pipeline on the sciCORE cluster... provided by the SWISS-MODEL team ;)

QMEAN - Qualitative Model Energy ANalysis

General purpose Snakemake RNA-seq analysis workflow

Pathways allows you to compute importance scores for a a list of metabolic pathways.

Tools to import models of the Wilkins group (Tara) to ModelArchive

scripts and tools to evaluate monochrome cameras (for microscopy)