Explore projects

Run the AlphaFold2 pipeline on the sciCORE cluster... provided by the SWISS-MODEL team ;)

QMEAN - Qualitative Model Energy ANalysis

General purpose Snakemake RNA-seq analysis workflow

imcf-adaptation of Myosoft, a Fiji script that identifies muscle fibers in images of sections

Pathways allows you to compute importance scores for a a list of metabolic pathways.

Tools to import models of the Wilkins group (Tara) to ModelArchive

scripts and tools to evaluate monochrome cameras (for microscopy)

An easy-to-use ImageJ macro for measuring SNR (signal-to-noise ratio) of light microscopes.

This project contains all scripts and descriptions to enable the execution of a streamlined pipeline that processes A-seq2 read libraries up to the reporting of individual and clustered 3' end processing sites.

Fork of the cathsm-server repo (https://github.com/CATH-SWISSMODEL/cathsm-server) for the tutorial "Beyond the usual Docker tutorial - Web apps & CI" at [BC]^2 Conference 2021