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ProMod3 - A Versatile Homology Modelling Toolbox

MIRZA-G pipeline code written for Jobber.

Django web framework workshop, Monday 29th June from 10:15 to 12:00 in the sky lounge.

Comparative assessment of methods for the computational inference of transcript isoform from RNA-seq data. Submitted to Genome Biology (03-2015).

QMEAN - Qualitative Model Energy ANalysis

Python script that can be used to compress a directory including all its files and subdirectories.

HTSinfer is a computational tool to infer meta-data from High Throughput Sequencing (HTS) data.

This project contains all scripts and descriptions to enable the execution of a streamlined pipeline that processes A-seq2 read libraries up to the reporting of individual and clustered 3' end processing sites.

ImageJ-macro to batch analyse all PSF images in a folder

Open-Source Computational Structural Biology Framework

Copy of of the original IPLT repository

Metagenomics pipeline for human microbiome analysis with SnakeMake and singularity containers.

A Windows service doing automatic background file transfers to a UNC path with email reporting to users and error reporting to admins.

scripts, pipelines and documentation to run PAQR and KAPAC

KAPAC allows to infer regulatory sequence motifs implicated in 3’ end processing changes

PAQR enables the quantification of poly(A) site usage from standard RNA-seq data

package to correct CTF

Copy of of the original IPLT repository

Pathways allows you to compute importance scores for a a list of metabolic pathways.

Python tool to reduce size and redundancy of phylogenetic datasets

singularity definition files

An easy-to-use ImageJ macro for measuring SNR (signal-to-noise ratio) of light microscopes.