Explore projects

drugsens is a R-package that allows users to automatically analyze QuPath™ output data from imaging analysis

Generates an ASCII-style pileup of read alignments in one or more BAM files against one or more regions specified in a BED file

scripts, pipelines and documentation to run PAQR and KAPAC

KAPAC allows to infer regulatory sequence motifs implicated in 3’ end processing changes

PAQR enables the quantification of poly(A) site usage from standard RNA-seq data

Python tool to reduce size and redundancy of phylogenetic datasets

Material and data for the workshop in South Africa (2018)

Comparative assessment of methods for the computational inference of transcript isoform from RNA-seq data. Submitted to Genome Biology (03-2015).