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User-friendly command-line interface for the ZARP RNA-Seq analysis pipeline

General purpose Snakemake RNA-seq analysis workflow

Material and data for the workshop in South Africa (2018)

Data integration and annotation workflows

Python tool to reduce size and redundancy of phylogenetic datasets

TACOS is a diverse Set Of Commands And Tools (SOCAT, but TACOS sounds much better!).

The projects implements a simulation of single cell RNA sequencing (scRNA-seq), accounting for some common sources noise that complicate the analysis of the resulting data.

Riboseq Pipeline

QMEAN - Qualitative Model Energy ANalysis

ModelArchive Python package... functionality to do all kinds of things with ModelArchive and ModelCIF.

Benchmark pipelines for the ProMod3 modelling engine

ProMod3 - A Versatile Homology Modelling Toolbox