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Commit 02a7a4ea authored by Laurent Guerard's avatar Laurent Guerard
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Make the output dir input not mandatory

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1_identify_fibers.py
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# @ String (visibility=MESSAGE, value="<html><b> Welcome to Myosoft - identify fibers! </b></html>") msg1 # @ String (visibility=MESSAGE, value="<html><b> Welcome to Myosoft - identify fibers! </b></html>") msg1
# @ File (label="Select folder with your images", description="select folder with your images", style="directory") src_dir # @ File (label="Select folder with your images", description="select folder with your images", style="directory") src_dir
# @ String(label="Extension for the images to look for", value="czi") filename_filter # @ String(label="Extension for the images to look for", value="czi") filename_filter
# @ File (label="Select directory for output", style="directory") output_dir # @ File (label="Select directory for output", style="directory", required=False) output_dir
# @ File(label="Cellpose environment folder", style="directory", description="Folder with the cellpose env") cellpose_dir # @ File(label="Cellpose environment folder", style="directory", description="Folder with the cellpose env") cellpose_dir
# @ Boolean (label="close image after processing", description="tick this box when using batch mode", value=False) close_raw # @ Boolean (label="close image after processing", description="tick this box when using batch mode", value=False) close_raw
# @ String (visibility=MESSAGE, value="<html><b> Morphometric Gates </b></html>") msg2 # @ String (visibility=MESSAGE, value="<html><b> Morphometric Gates </b></html>") msg2
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